Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.31■□□□□ 0.2
RSPO1Q2MKA7 AP006294.2-201ENST00000641667 209 ntBASIC16.31■□□□□ 0.2
RSPO1Q2MKA7 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.31■□□□□ 0.2
RSPO1Q2MKA7 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RSPO1Q2MKA7 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RSPO1Q2MKA7 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RSPO1Q2MKA7 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
RSPO1Q2MKA7 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.31■□□□□ 0.2
RSPO1Q2MKA7 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.31■□□□□ 0.2
RSPO1Q2MKA7 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RSPO1Q2MKA7 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.31■□□□□ 0.2
RSPO1Q2MKA7 AC008556.1-201ENST00000610908 2040 ntBASIC16.31■□□□□ 0.2
RSPO1Q2MKA7 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RSPO1Q2MKA7 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RSPO1Q2MKA7 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RSPO1Q2MKA7 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RSPO1Q2MKA7 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
RSPO1Q2MKA7 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RSPO1Q2MKA7 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RSPO1Q2MKA7 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RSPO1Q2MKA7 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RSPO1Q2MKA7 AL109659.2-201ENST00000606809 1674 ntBASIC16.3■□□□□ 0.2
RSPO1Q2MKA7 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RSPO1Q2MKA7 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RSPO1Q2MKA7 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RSPO1Q2MKA7 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.3■□□□□ 0.2
RSPO1Q2MKA7 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RSPO1Q2MKA7 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.3■□□□□ 0.2
RSPO1Q2MKA7 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RSPO1Q2MKA7 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RSPO1Q2MKA7 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.3■□□□□ 0.2
RSPO1Q2MKA7 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RSPO1Q2MKA7 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RSPO1Q2MKA7 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RSPO1Q2MKA7 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RSPO1Q2MKA7 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RSPO1Q2MKA7 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RSPO1Q2MKA7 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RSPO1Q2MKA7 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
RSPO1Q2MKA7 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
RSPO1Q2MKA7 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RSPO1Q2MKA7 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RSPO1Q2MKA7 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.3■□□□□ 0.2
RSPO1Q2MKA7 TSPY15P-201ENST00000457163 923 ntBASIC16.3■□□□□ 0.2
RSPO1Q2MKA7 SNORA78-201ENST00000459373 127 ntBASIC16.3■□□□□ 0.2
RSPO1Q2MKA7 CA15P1-201ENST00000481698 905 ntBASIC16.3■□□□□ 0.2
RSPO1Q2MKA7 AP005242.2-201ENST00000580065 1175 ntBASIC16.3■□□□□ 0.2
RSPO1Q2MKA7 AL023803.3-201ENST00000615559 522 ntBASIC16.3■□□□□ 0.2
RSPO1Q2MKA7 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.3■□□□□ 0.2
RSPO1Q2MKA7 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
RSPO1Q2MKA7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RSPO1Q2MKA7 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RSPO1Q2MKA7 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.3■□□□□ 0.2
RSPO1Q2MKA7 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
RSPO1Q2MKA7 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RSPO1Q2MKA7 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RSPO1Q2MKA7 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.29■□□□□ 0.2
RSPO1Q2MKA7 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RSPO1Q2MKA7 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RSPO1Q2MKA7 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RSPO1Q2MKA7 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RSPO1Q2MKA7 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.29■□□□□ 0.2
RSPO1Q2MKA7 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RSPO1Q2MKA7 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RSPO1Q2MKA7 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RSPO1Q2MKA7 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RSPO1Q2MKA7 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.29■□□□□ 0.2
RSPO1Q2MKA7 AL023284.2-201ENST00000405850 579 ntBASIC16.29■□□□□ 0.2
RSPO1Q2MKA7 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.29■□□□□ 0.2
RSPO1Q2MKA7 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.29■□□□□ 0.2
RSPO1Q2MKA7 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
RSPO1Q2MKA7 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RSPO1Q2MKA7 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
RSPO1Q2MKA7 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.29■□□□□ 0.2
RSPO1Q2MKA7 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.29■□□□□ 0.2
RSPO1Q2MKA7 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.29■□□□□ 0.2
RSPO1Q2MKA7 GPAT2P1-201ENST00000444924 1672 ntBASIC16.29■□□□□ 0.2
RSPO1Q2MKA7 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RSPO1Q2MKA7 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RSPO1Q2MKA7 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
RSPO1Q2MKA7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RSPO1Q2MKA7 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RSPO1Q2MKA7 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.29■□□□□ 0.2
RSPO1Q2MKA7 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RSPO1Q2MKA7 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RSPO1Q2MKA7 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
RSPO1Q2MKA7 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RSPO1Q2MKA7 AC073592.3-201ENST00000625118 1834 ntBASIC16.29■□□□□ 0.2
RSPO1Q2MKA7 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RSPO1Q2MKA7 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RSPO1Q2MKA7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RSPO1Q2MKA7 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RSPO1Q2MKA7 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RSPO1Q2MKA7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RSPO1Q2MKA7 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.28■□□□□ 0.2
RSPO1Q2MKA7 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RSPO1Q2MKA7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RSPO1Q2MKA7 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RSPO1Q2MKA7 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RSPO1Q2MKA7 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms