Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CX3CL1P78423 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CX3CL1P78423 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC15.17■□□□□ 0.02
CX3CL1P78423 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CX3CL1P78423 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CX3CL1P78423 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CX3CL1P78423 RCC2P6-201ENST00000526625 1557 ntBASIC15.17■□□□□ 0.02
CX3CL1P78423 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CX3CL1P78423 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC15.17■□□□□ 0.02
CX3CL1P78423 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CX3CL1P78423 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CX3CL1P78423 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CX3CL1P78423 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
CX3CL1P78423 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CX3CL1P78423 DERL1-203ENST00000419562 918 ntTSL 2 BASIC15.17■□□□□ 0.02
CX3CL1P78423 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC15.17■□□□□ 0.02
CX3CL1P78423 REXO2-216ENST00000544196 452 ntTSL 3 BASIC15.17■□□□□ 0.02
CX3CL1P78423 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC15.17■□□□□ 0.02
CX3CL1P78423 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CX3CL1P78423 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CX3CL1P78423 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CX3CL1P78423 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CX3CL1P78423 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC15.17■□□□□ 0.02
CX3CL1P78423 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CX3CL1P78423 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
CX3CL1P78423 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CX3CL1P78423 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CX3CL1P78423 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CX3CL1P78423 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CX3CL1P78423 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CX3CL1P78423 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CX3CL1P78423 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CX3CL1P78423 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CX3CL1P78423 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC15.16■□□□□ 0.02
CX3CL1P78423 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC15.16■□□□□ 0.02
CX3CL1P78423 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CX3CL1P78423 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC15.16■□□□□ 0.02
CX3CL1P78423 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
CX3CL1P78423 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CX3CL1P78423 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CX3CL1P78423 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC15.16■□□□□ 0.02
CX3CL1P78423 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CX3CL1P78423 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CX3CL1P78423 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CX3CL1P78423 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC15.16■□□□□ 0.02
CX3CL1P78423 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CX3CL1P78423 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CX3CL1P78423 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CX3CL1P78423 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CX3CL1P78423 IRX1P1-201ENST00000438849 1838 ntBASIC15.16■□□□□ 0.02
CX3CL1P78423 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CX3CL1P78423 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC15.16■□□□□ 0.02
CX3CL1P78423 MDFI-202ENST00000373050 809 ntTSL 2 BASIC15.16■□□□□ 0.02
CX3CL1P78423 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CX3CL1P78423 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC15.16■□□□□ 0.02
CX3CL1P78423 AC091390.4-202ENST00000476426 537 ntBASIC15.16■□□□□ 0.02
CX3CL1P78423 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC15.16■□□□□ 0.02
CX3CL1P78423 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC15.16■□□□□ 0.02
CX3CL1P78423 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
CX3CL1P78423 GRAP-204ENST00000573099 846 ntTSL 3 BASIC15.16■□□□□ 0.02
CX3CL1P78423 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC15.16■□□□□ 0.02
CX3CL1P78423 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CX3CL1P78423 AL161938.1-201ENST00000569833 2180 ntBASIC15.16■□□□□ 0.02
CX3CL1P78423 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC15.16■□□□□ 0.02
CX3CL1P78423 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC15.16■□□□□ 0.02
CX3CL1P78423 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
CX3CL1P78423 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CX3CL1P78423 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
CX3CL1P78423 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CX3CL1P78423 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CX3CL1P78423 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CX3CL1P78423 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CX3CL1P78423 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CX3CL1P78423 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
CX3CL1P78423 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CX3CL1P78423 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CX3CL1P78423 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CX3CL1P78423 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CX3CL1P78423 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CX3CL1P78423 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CX3CL1P78423 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CX3CL1P78423 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CX3CL1P78423 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
CX3CL1P78423 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CX3CL1P78423 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CX3CL1P78423 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CX3CL1P78423 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CX3CL1P78423 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CX3CL1P78423 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC15.15■□□□□ 0.02
CX3CL1P78423 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CX3CL1P78423 TSPY23P-201ENST00000440136 739 ntBASIC15.15■□□□□ 0.02
CX3CL1P78423 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC15.15■□□□□ 0.02
CX3CL1P78423 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC15.15■□□□□ 0.02
CX3CL1P78423 PENK-204ENST00000518770 863 ntTSL 2 BASIC15.15■□□□□ 0.02
CX3CL1P78423 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CX3CL1P78423 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
CX3CL1P78423 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC15.15■□□□□ 0.02
CX3CL1P78423 MIR6786-201ENST00000616843 113 ntBASIC15.15■□□□□ 0.02
CX3CL1P78423 AC011298.2-201ENST00000617989 482 ntBASIC15.15■□□□□ 0.02
CX3CL1P78423 AC130371.2-201ENST00000619443 611 ntBASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms