Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.7■□□□□ 0.42
RAB38P57729 AC120498.9-201ENST00000339021 3867 ntBASIC17.7■□□□□ 0.42
RAB38P57729 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.7■□□□□ 0.42
RAB38P57729 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.7■□□□□ 0.42
RAB38P57729 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.7■□□□□ 0.42
RAB38P57729 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB38P57729 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB38P57729 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB38P57729 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB38P57729 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.7■□□□□ 0.42
RAB38P57729 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
RAB38P57729 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB38P57729 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.69■□□□□ 0.42
RAB38P57729 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
RAB38P57729 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.69■□□□□ 0.42
RAB38P57729 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.69■□□□□ 0.42
RAB38P57729 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.69■□□□□ 0.42
RAB38P57729 AL512604.3-201ENST00000569583 964 ntBASIC17.69■□□□□ 0.42
RAB38P57729 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.69■□□□□ 0.42
RAB38P57729 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.69■□□□□ 0.42
RAB38P57729 AC005363.2-201ENST00000618631 242 ntBASIC17.69■□□□□ 0.42
RAB38P57729 CR769767.2-201ENST00000622735 460 ntBASIC17.69■□□□□ 0.42
RAB38P57729 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RAB38P57729 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB38P57729 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RAB38P57729 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.69■□□□□ 0.42
RAB38P57729 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.69■□□□□ 0.42
RAB38P57729 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB38P57729 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB38P57729 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RAB38P57729 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RAB38P57729 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB38P57729 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.68■□□□□ 0.42
RAB38P57729 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RAB38P57729 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RAB38P57729 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
RAB38P57729 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
RAB38P57729 KRT8P45-201ENST00000414328 1447 ntBASIC17.68■□□□□ 0.42
RAB38P57729 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RAB38P57729 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.68■□□□□ 0.42
RAB38P57729 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.68■□□□□ 0.42
RAB38P57729 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.68■□□□□ 0.42
RAB38P57729 WWOX-216ENST00000569818 525 ntBASIC17.68■□□□□ 0.42
RAB38P57729 AC008556.1-201ENST00000610908 2040 ntBASIC17.68■□□□□ 0.42
RAB38P57729 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB38P57729 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB38P57729 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.68■□□□□ 0.42
RAB38P57729 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB38P57729 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.68■□□□□ 0.42
RAB38P57729 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
RAB38P57729 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB38P57729 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
RAB38P57729 MTMR9LP-203ENST00000426597 1545 ntBASIC17.67■□□□□ 0.42
RAB38P57729 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
RAB38P57729 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.67■□□□□ 0.42
RAB38P57729 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB38P57729 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
RAB38P57729 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAB38P57729 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB38P57729 AC036111.1-201ENST00000533973 1582 ntBASIC17.67■□□□□ 0.42
RAB38P57729 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB38P57729 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
RAB38P57729 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB38P57729 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB38P57729 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.67■□□□□ 0.42
RAB38P57729 AC113347.1-201ENST00000413321 391 ntBASIC17.67■□□□□ 0.42
RAB38P57729 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.67■□□□□ 0.42
RAB38P57729 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAB38P57729 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.67■□□□□ 0.42
RAB38P57729 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB38P57729 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAB38P57729 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.66■□□□□ 0.42
RAB38P57729 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
RAB38P57729 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAB38P57729 AC093525.10-201ENST00000625130 1569 ntBASIC17.66■□□□□ 0.42
RAB38P57729 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RAB38P57729 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RAB38P57729 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB38P57729 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB38P57729 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB38P57729 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB38P57729 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.66■□□□□ 0.42
RAB38P57729 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAB38P57729 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB38P57729 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAB38P57729 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAB38P57729 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB38P57729 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAB38P57729 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB38P57729 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAB38P57729 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.66■□□□□ 0.42
RAB38P57729 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB38P57729 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.66■□□□□ 0.42
RAB38P57729 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RAB38P57729 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.66■□□□□ 0.42
RAB38P57729 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.66■□□□□ 0.42
RAB38P57729 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
RAB38P57729 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB38P57729 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.66■□□□□ 0.42
RAB38P57729 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms