Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VCPP55072 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
VCPP55072 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
VCPP55072 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VCPP55072 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
VCPP55072 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
VCPP55072 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.13■□□□□ 0.81
VCPP55072 FDX1P1-201ENST00000449115 551 ntBASIC20.13■□□□□ 0.81
VCPP55072 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
VCPP55072 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.13■□□□□ 0.81
VCPP55072 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
VCPP55072 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.13■□□□□ 0.81
VCPP55072 AC130371.2-201ENST00000619443 611 ntBASIC20.13■□□□□ 0.81
VCPP55072 HLA-A-209ENST00000638375 975 ntBASIC20.13■□□□□ 0.81
VCPP55072 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VCPP55072 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VCPP55072 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
VCPP55072 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
VCPP55072 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VCPP55072 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VCPP55072 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.13■□□□□ 0.81
VCPP55072 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
VCPP55072 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.12■□□□□ 0.81
VCPP55072 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VCPP55072 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
VCPP55072 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VCPP55072 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
VCPP55072 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.12■□□□□ 0.81
VCPP55072 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
VCPP55072 AC004980.1-204ENST00000429707 299 ntBASIC20.12■□□□□ 0.81
VCPP55072 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VCPP55072 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
VCPP55072 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.12■□□□□ 0.81
VCPP55072 AC023511.2-201ENST00000618803 211 ntBASIC20.12■□□□□ 0.81
VCPP55072 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.12■□□□□ 0.81
VCPP55072 AC141257.4-201ENST00000634557 245 ntBASIC20.12■□□□□ 0.81
VCPP55072 AC136944.6-201ENST00000634818 245 ntBASIC20.12■□□□□ 0.81
VCPP55072 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.12■□□□□ 0.81
VCPP55072 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
VCPP55072 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VCPP55072 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
VCPP55072 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VCPP55072 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VCPP55072 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
VCPP55072 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.11■□□□□ 0.81
VCPP55072 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
VCPP55072 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
VCPP55072 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
VCPP55072 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
VCPP55072 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VCPP55072 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VCPP55072 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
VCPP55072 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
VCPP55072 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VCPP55072 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VCPP55072 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VCPP55072 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.11■□□□□ 0.81
VCPP55072 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VCPP55072 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
VCPP55072 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.11■□□□□ 0.81
VCPP55072 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
VCPP55072 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VCPP55072 TSPY21P-201ENST00000433481 731 ntBASIC20.11■□□□□ 0.81
VCPP55072 TSPY23P-201ENST00000440136 739 ntBASIC20.11■□□□□ 0.81
VCPP55072 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VCPP55072 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.11■□□□□ 0.81
VCPP55072 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VCPP55072 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.11■□□□□ 0.81
VCPP55072 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VCPP55072 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.11■□□□□ 0.81
VCPP55072 AC116562.4-202ENST00000641738 218 ntBASIC20.11■□□□□ 0.81
VCPP55072 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VCPP55072 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
VCPP55072 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
VCPP55072 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.11■□□□□ 0.81
VCPP55072 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.11■□□□□ 0.81
VCPP55072 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.11■□□□□ 0.81
VCPP55072 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
VCPP55072 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
VCPP55072 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VCPP55072 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
VCPP55072 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VCPP55072 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VCPP55072 AP000593.1-201ENST00000393668 712 ntBASIC20.1■□□□□ 0.81
VCPP55072 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
VCPP55072 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
VCPP55072 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
VCPP55072 HOMER2P1-201ENST00000455653 964 ntBASIC20.1■□□□□ 0.81
VCPP55072 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.1■□□□□ 0.81
VCPP55072 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.1■□□□□ 0.81
VCPP55072 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
VCPP55072 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VCPP55072 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.1■□□□□ 0.81
VCPP55072 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.1■□□□□ 0.81
VCPP55072 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.1■□□□□ 0.81
VCPP55072 AC093503.3-201ENST00000624917 2352 ntBASIC20.1■□□□□ 0.81
VCPP55072 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
VCPP55072 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VCPP55072 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VCPP55072 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms