Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
NUBP1P53384 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
NUBP1P53384 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.73■□□□□ 0.59
NUBP1P53384 AC004832.2-201ENST00000426397 482 ntBASIC18.73■□□□□ 0.59
NUBP1P53384 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.73■□□□□ 0.59
NUBP1P53384 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
NUBP1P53384 AC132008.2-207ENST00000454517 770 ntBASIC18.73■□□□□ 0.59
NUBP1P53384 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.73■□□□□ 0.59
NUBP1P53384 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.73■□□□□ 0.59
NUBP1P53384 BNIP3P18-201ENST00000593976 575 ntBASIC18.73■□□□□ 0.59
NUBP1P53384 AC008750.5-201ENST00000595500 473 ntTSL 2 BASIC18.73■□□□□ 0.59
NUBP1P53384 AC092364.2-202ENST00000597012 1073 ntBASIC18.73■□□□□ 0.59
NUBP1P53384 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.73■□□□□ 0.59
NUBP1P53384 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.73■□□□□ 0.59
NUBP1P53384 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NUBP1P53384 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.73■□□□□ 0.59
NUBP1P53384 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NUBP1P53384 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.73■□□□□ 0.59
NUBP1P53384 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
NUBP1P53384 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
NUBP1P53384 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
NUBP1P53384 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
NUBP1P53384 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
NUBP1P53384 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NUBP1P53384 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.72■□□□□ 0.59
NUBP1P53384 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.72■□□□□ 0.59
NUBP1P53384 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.72■□□□□ 0.59
NUBP1P53384 AP006288.1-201ENST00000446065 395 ntBASIC18.72■□□□□ 0.59
NUBP1P53384 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.72■□□□□ 0.59
NUBP1P53384 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.72■□□□□ 0.59
NUBP1P53384 KATNBL1P4-201ENST00000503545 918 ntBASIC18.72■□□□□ 0.59
NUBP1P53384 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.72■□□□□ 0.59
NUBP1P53384 AC022148.2-201ENST00000586176 560 ntBASIC18.72■□□□□ 0.59
NUBP1P53384 AC239800.4-201ENST00000603712 296 ntBASIC18.72■□□□□ 0.59
NUBP1P53384 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NUBP1P53384 AL512356.3-201ENST00000623005 461 ntBASIC18.72■□□□□ 0.59
NUBP1P53384 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.72■□□□□ 0.59
NUBP1P53384 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NUBP1P53384 KRT8P3-201ENST00000519669 1449 ntBASIC18.72■□□□□ 0.59
NUBP1P53384 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.72■□□□□ 0.59
NUBP1P53384 AL024507.2-201ENST00000606070 2574 ntBASIC18.72■□□□□ 0.59
NUBP1P53384 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NUBP1P53384 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
NUBP1P53384 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NUBP1P53384 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.71■□□□□ 0.59
NUBP1P53384 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
NUBP1P53384 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
NUBP1P53384 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NUBP1P53384 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NUBP1P53384 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
NUBP1P53384 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.71■□□□□ 0.59
NUBP1P53384 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NUBP1P53384 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.71■□□□□ 0.59
NUBP1P53384 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.71■□□□□ 0.59
NUBP1P53384 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NUBP1P53384 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NUBP1P53384 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NUBP1P53384 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
NUBP1P53384 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.71■□□□□ 0.59
NUBP1P53384 ZNF736P11Y-201ENST00000442535 1213 ntBASIC18.71■□□□□ 0.59
NUBP1P53384 ZNF736P12Y-201ENST00000443152 1243 ntBASIC18.71■□□□□ 0.59
NUBP1P53384 ZNF736P4Y-201ENST00000454995 1243 ntBASIC18.71■□□□□ 0.59
NUBP1P53384 FGFR3P6-201ENST00000457012 610 ntBASIC18.71■□□□□ 0.59
NUBP1P53384 AC104629.1-201ENST00000494226 508 ntBASIC18.71■□□□□ 0.59
NUBP1P53384 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.71■□□□□ 0.59
NUBP1P53384 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
NUBP1P53384 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.71■□□□□ 0.59
NUBP1P53384 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC18.71■□□□□ 0.59
NUBP1P53384 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
NUBP1P53384 AC024563.2-201ENST00000603282 481 ntBASIC18.71■□□□□ 0.59
NUBP1P53384 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.71■□□□□ 0.59
NUBP1P53384 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.71■□□□□ 0.59
NUBP1P53384 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NUBP1P53384 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.71■□□□□ 0.59
NUBP1P53384 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NUBP1P53384 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NUBP1P53384 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NUBP1P53384 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NUBP1P53384 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.7■□□□□ 0.58
NUBP1P53384 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.7■□□□□ 0.58
NUBP1P53384 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
NUBP1P53384 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NUBP1P53384 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
NUBP1P53384 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.7■□□□□ 0.58
NUBP1P53384 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NUBP1P53384 DNAJB3-202ENST00000449667 1266 ntBASIC18.7■□□□□ 0.58
NUBP1P53384 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
NUBP1P53384 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.7■□□□□ 0.58
NUBP1P53384 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.7■□□□□ 0.58
NUBP1P53384 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NUBP1P53384 AL079304.1-201ENST00000554595 828 ntTSL 2 BASIC18.7■□□□□ 0.58
NUBP1P53384 AC034105.1-201ENST00000563488 319 ntBASIC18.7■□□□□ 0.58
NUBP1P53384 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NUBP1P53384 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.7■□□□□ 0.58
NUBP1P53384 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NUBP1P53384 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NUBP1P53384 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.7■□□□□ 0.58
NUBP1P53384 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NUBP1P53384 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
NUBP1P53384 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms