Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SSR4P51571 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.27■□□□□ 0.36
SSR4P51571 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SSR4P51571 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
SSR4P51571 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.27■□□□□ 0.36
SSR4P51571 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SSR4P51571 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SSR4P51571 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.27■□□□□ 0.36
SSR4P51571 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.27■□□□□ 0.36
SSR4P51571 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.27■□□□□ 0.36
SSR4P51571 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SSR4P51571 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
SSR4P51571 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
SSR4P51571 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
SSR4P51571 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SSR4P51571 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SSR4P51571 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.27■□□□□ 0.35
SSR4P51571 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SSR4P51571 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.26■□□□□ 0.35
SSR4P51571 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SSR4P51571 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.26■□□□□ 0.35
SSR4P51571 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSR4P51571 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSR4P51571 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.26■□□□□ 0.35
SSR4P51571 KRT8P32-201ENST00000512863 1461 ntBASIC17.26■□□□□ 0.35
SSR4P51571 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SSR4P51571 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.26■□□□□ 0.35
SSR4P51571 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSR4P51571 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SSR4P51571 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSR4P51571 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.26■□□□□ 0.35
SSR4P51571 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.26■□□□□ 0.35
SSR4P51571 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SSR4P51571 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.26■□□□□ 0.35
SSR4P51571 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSR4P51571 AL359075.1-203ENST00000462729 1002 ntBASIC17.26■□□□□ 0.35
SSR4P51571 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.26■□□□□ 0.35
SSR4P51571 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.26■□□□□ 0.35
SSR4P51571 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.26■□□□□ 0.35
SSR4P51571 GCSHP2-201ENST00000560971 527 ntBASIC17.26■□□□□ 0.35
SSR4P51571 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
SSR4P51571 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
SSR4P51571 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSR4P51571 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSR4P51571 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSR4P51571 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSR4P51571 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.26■□□□□ 0.35
SSR4P51571 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSR4P51571 AC005332.7-201ENST00000614046 2005 ntBASIC17.26■□□□□ 0.35
SSR4P51571 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSR4P51571 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SSR4P51571 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSR4P51571 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSR4P51571 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSR4P51571 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSR4P51571 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
SSR4P51571 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSR4P51571 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSR4P51571 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSR4P51571 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SSR4P51571 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.25■□□□□ 0.35
SSR4P51571 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.25■□□□□ 0.35
SSR4P51571 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.25■□□□□ 0.35
SSR4P51571 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.25■□□□□ 0.35
SSR4P51571 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.25■□□□□ 0.35
SSR4P51571 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.25■□□□□ 0.35
SSR4P51571 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
SSR4P51571 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSR4P51571 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SSR4P51571 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.25■□□□□ 0.35
SSR4P51571 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSR4P51571 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.25■□□□□ 0.35
SSR4P51571 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.25■□□□□ 0.35
SSR4P51571 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SSR4P51571 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSR4P51571 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SSR4P51571 AC008556.1-201ENST00000610908 2040 ntBASIC17.25■□□□□ 0.35
SSR4P51571 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSR4P51571 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSR4P51571 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSR4P51571 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SSR4P51571 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSR4P51571 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSR4P51571 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.24■□□□□ 0.35
SSR4P51571 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
SSR4P51571 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSR4P51571 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.24■□□□□ 0.35
SSR4P51571 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.24■□□□□ 0.35
SSR4P51571 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSR4P51571 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SSR4P51571 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SSR4P51571 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSR4P51571 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.24■□□□□ 0.35
SSR4P51571 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SSR4P51571 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SSR4P51571 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SSR4P51571 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSR4P51571 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
SSR4P51571 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSR4P51571 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms