Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.49■□□□□ 0.39
RNF144AP50876 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.49■□□□□ 0.39
RNF144AP50876 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.49■□□□□ 0.39
RNF144AP50876 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF144AP50876 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.49■□□□□ 0.39
RNF144AP50876 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF144AP50876 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF144AP50876 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.49■□□□□ 0.39
RNF144AP50876 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.49■□□□□ 0.39
RNF144AP50876 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RNF144AP50876 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
RNF144AP50876 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
RNF144AP50876 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.49■□□□□ 0.39
RNF144AP50876 AC004951.3-201ENST00000418645 1148 ntBASIC17.49■□□□□ 0.39
RNF144AP50876 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.49■□□□□ 0.39
RNF144AP50876 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.49■□□□□ 0.39
RNF144AP50876 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
RNF144AP50876 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
RNF144AP50876 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RNF144AP50876 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RNF144AP50876 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.49■□□□□ 0.39
RNF144AP50876 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.49■□□□□ 0.39
RNF144AP50876 AL031985.4-201ENST00000642138 673 ntBASIC17.49■□□□□ 0.39
RNF144AP50876 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RNF144AP50876 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.49■□□□□ 0.39
RNF144AP50876 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF144AP50876 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
RNF144AP50876 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF144AP50876 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
RNF144AP50876 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RNF144AP50876 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF144AP50876 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.49■□□□□ 0.39
RNF144AP50876 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF144AP50876 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF144AP50876 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF144AP50876 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNF144AP50876 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RNF144AP50876 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF144AP50876 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF144AP50876 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
RNF144AP50876 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF144AP50876 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF144AP50876 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF144AP50876 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF144AP50876 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNF144AP50876 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RNF144AP50876 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF144AP50876 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.48■□□□□ 0.39
RNF144AP50876 MESTP1-201ENST00000404287 994 ntBASIC17.48■□□□□ 0.39
RNF144AP50876 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
RNF144AP50876 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNF144AP50876 TSPY21P-201ENST00000433481 731 ntBASIC17.48■□□□□ 0.39
RNF144AP50876 B3GAT3P1-201ENST00000471720 806 ntBASIC17.48■□□□□ 0.39
RNF144AP50876 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNF144AP50876 AC008550.1-201ENST00000511500 884 ntBASIC17.48■□□□□ 0.39
RNF144AP50876 MIR6786-201ENST00000616843 113 ntBASIC17.48■□□□□ 0.39
RNF144AP50876 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.48■□□□□ 0.39
RNF144AP50876 AL049637.2-201ENST00000641778 930 ntBASIC17.48■□□□□ 0.39
RNF144AP50876 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.48■□□□□ 0.39
RNF144AP50876 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
RNF144AP50876 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF144AP50876 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNF144AP50876 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF144AP50876 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.48■□□□□ 0.39
RNF144AP50876 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RNF144AP50876 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.48■□□□□ 0.39
RNF144AP50876 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNF144AP50876 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF144AP50876 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNF144AP50876 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.47■□□□□ 0.39
RNF144AP50876 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
RNF144AP50876 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF144AP50876 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.47■□□□□ 0.39
RNF144AP50876 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF144AP50876 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF144AP50876 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF144AP50876 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF144AP50876 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF144AP50876 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
RNF144AP50876 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNF144AP50876 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNF144AP50876 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF144AP50876 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF144AP50876 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.47■□□□□ 0.39
RNF144AP50876 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF144AP50876 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF144AP50876 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.47■□□□□ 0.39
RNF144AP50876 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF144AP50876 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
RNF144AP50876 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.47■□□□□ 0.39
RNF144AP50876 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.47■□□□□ 0.39
RNF144AP50876 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNF144AP50876 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.47■□□□□ 0.39
RNF144AP50876 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.47■□□□□ 0.39
RNF144AP50876 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.47■□□□□ 0.39
RNF144AP50876 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.47■□□□□ 0.39
RNF144AP50876 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF144AP50876 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF144AP50876 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.47■□□□□ 0.39
RNF144AP50876 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms