Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 MIR3180-4-201ENST00000582223 153 ntBASIC20.85■□□□□ 0.93
CPT1AP50416 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.85■□□□□ 0.93
CPT1AP50416 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPT1AP50416 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
CPT1AP50416 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPT1AP50416 AC034236.2-201ENST00000606662 1610 ntBASIC20.85■□□□□ 0.93
CPT1AP50416 Z83836.1-201ENST00000624605 1642 ntBASIC20.85■□□□□ 0.93
CPT1AP50416 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPT1AP50416 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPT1AP50416 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.85■□□□□ 0.93
CPT1AP50416 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CPT1AP50416 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CPT1AP50416 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CPT1AP50416 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPT1AP50416 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPT1AP50416 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CPT1AP50416 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPT1AP50416 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
CPT1AP50416 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.84■□□□□ 0.93
CPT1AP50416 LINC00265-3P-201ENST00000447588 903 ntBASIC20.84■□□□□ 0.93
CPT1AP50416 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CPT1AP50416 AP000867.3-201ENST00000524675 377 ntBASIC20.84■□□□□ 0.93
CPT1AP50416 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CPT1AP50416 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.84■□□□□ 0.93
CPT1AP50416 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CPT1AP50416 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPT1AP50416 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.84■□□□□ 0.93
CPT1AP50416 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.84■□□□□ 0.93
CPT1AP50416 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CPT1AP50416 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPT1AP50416 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CPT1AP50416 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPT1AP50416 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPT1AP50416 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CPT1AP50416 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.83■□□□□ 0.93
CPT1AP50416 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CPT1AP50416 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CPT1AP50416 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CPT1AP50416 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.83■□□□□ 0.93
CPT1AP50416 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
CPT1AP50416 AP003733.1-201ENST00000491725 852 ntBASIC20.83■□□□□ 0.93
CPT1AP50416 UNC93B7-201ENST00000509439 705 ntBASIC20.83■□□□□ 0.93
CPT1AP50416 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CPT1AP50416 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.83■□□□□ 0.93
CPT1AP50416 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CPT1AP50416 AC090616.6-201ENST00000582640 721 ntBASIC20.83■□□□□ 0.93
CPT1AP50416 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.83■□□□□ 0.93
CPT1AP50416 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.83■□□□□ 0.93
CPT1AP50416 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CPT1AP50416 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CPT1AP50416 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CPT1AP50416 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CPT1AP50416 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CPT1AP50416 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.83■□□□□ 0.92
CPT1AP50416 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CPT1AP50416 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CPT1AP50416 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
CPT1AP50416 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CPT1AP50416 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CPT1AP50416 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.82■□□□□ 0.92
CPT1AP50416 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.82■□□□□ 0.92
CPT1AP50416 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CPT1AP50416 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CPT1AP50416 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPT1AP50416 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.82■□□□□ 0.92
CPT1AP50416 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CPT1AP50416 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPT1AP50416 KRT17P6-201ENST00000453795 1220 ntBASIC20.82■□□□□ 0.92
CPT1AP50416 TOB2P1-201ENST00000469761 992 ntBASIC20.82■□□□□ 0.92
CPT1AP50416 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.82■□□□□ 0.92
CPT1AP50416 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.82■□□□□ 0.92
CPT1AP50416 AC012615.1-201ENST00000565797 1299 ntBASIC20.82■□□□□ 0.92
CPT1AP50416 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.82■□□□□ 0.92
CPT1AP50416 AL121772.3-201ENST00000610840 674 ntBASIC20.82■□□□□ 0.92
CPT1AP50416 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.82■□□□□ 0.92
CPT1AP50416 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CPT1AP50416 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.82■□□□□ 0.92
CPT1AP50416 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.82■□□□□ 0.92
CPT1AP50416 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.82■□□□□ 0.92
CPT1AP50416 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPT1AP50416 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CPT1AP50416 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.82■□□□□ 0.92
CPT1AP50416 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CPT1AP50416 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.81■□□□□ 0.92
CPT1AP50416 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CPT1AP50416 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CPT1AP50416 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CPT1AP50416 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CPT1AP50416 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.81■□□□□ 0.92
CPT1AP50416 TSPY19P-201ENST00000418461 509 ntBASIC20.81■□□□□ 0.92
CPT1AP50416 TSPY18P-201ENST00000441642 509 ntBASIC20.81■□□□□ 0.92
CPT1AP50416 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.81■□□□□ 0.92
CPT1AP50416 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.81■□□□□ 0.92
CPT1AP50416 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CPT1AP50416 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.81■□□□□ 0.92
CPT1AP50416 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.81■□□□□ 0.92
CPT1AP50416 AC005332.3-201ENST00000589904 676 ntBASIC20.81■□□□□ 0.92
CPT1AP50416 IFNL4P1-201ENST00000607083 540 ntBASIC20.81■□□□□ 0.92
CPT1AP50416 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.81■□□□□ 0.92
CPT1AP50416 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms