Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.92■□□□□ 0.46
PRIM2P49643 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRIM2P49643 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRIM2P49643 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRIM2P49643 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
PRIM2P49643 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.92■□□□□ 0.46
PRIM2P49643 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.92■□□□□ 0.46
PRIM2P49643 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PRIM2P49643 AL031598.1-201ENST00000561511 1773 ntBASIC17.91■□□□□ 0.46
PRIM2P49643 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PRIM2P49643 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRIM2P49643 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRIM2P49643 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.91■□□□□ 0.46
PRIM2P49643 AC104581.1-202ENST00000635932 2618 ntBASIC17.91■□□□□ 0.46
PRIM2P49643 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.91■□□□□ 0.46
PRIM2P49643 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRIM2P49643 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PRIM2P49643 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PRIM2P49643 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.91■□□□□ 0.46
PRIM2P49643 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRIM2P49643 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRIM2P49643 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
PRIM2P49643 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PRIM2P49643 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRIM2P49643 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRIM2P49643 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PRIM2P49643 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.91■□□□□ 0.46
PRIM2P49643 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRIM2P49643 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRIM2P49643 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PRIM2P49643 FAM201B-201ENST00000458407 597 ntBASIC17.91■□□□□ 0.46
PRIM2P49643 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.91■□□□□ 0.46
PRIM2P49643 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PRIM2P49643 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.91■□□□□ 0.46
PRIM2P49643 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.91■□□□□ 0.46
PRIM2P49643 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRIM2P49643 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PRIM2P49643 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRIM2P49643 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PRIM2P49643 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
PRIM2P49643 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.91■□□□□ 0.46
PRIM2P49643 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.91■□□□□ 0.46
PRIM2P49643 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.91■□□□□ 0.46
PRIM2P49643 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.91■□□□□ 0.46
PRIM2P49643 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.91■□□□□ 0.46
PRIM2P49643 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRIM2P49643 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PRIM2P49643 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRIM2P49643 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRIM2P49643 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRIM2P49643 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRIM2P49643 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PRIM2P49643 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRIM2P49643 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.9■□□□□ 0.46
PRIM2P49643 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRIM2P49643 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.9■□□□□ 0.46
PRIM2P49643 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PRIM2P49643 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.9■□□□□ 0.46
PRIM2P49643 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.9■□□□□ 0.46
PRIM2P49643 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.9■□□□□ 0.46
PRIM2P49643 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRIM2P49643 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.9■□□□□ 0.46
PRIM2P49643 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRIM2P49643 AC093525.10-201ENST00000625130 1569 ntBASIC17.9■□□□□ 0.46
PRIM2P49643 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRIM2P49643 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PRIM2P49643 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRIM2P49643 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PRIM2P49643 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRIM2P49643 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.9■□□□□ 0.46
PRIM2P49643 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
PRIM2P49643 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PRIM2P49643 WIZP1-201ENST00000531444 2299 ntBASIC17.89■□□□□ 0.46
PRIM2P49643 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
PRIM2P49643 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
PRIM2P49643 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PRIM2P49643 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PRIM2P49643 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PRIM2P49643 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PRIM2P49643 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
PRIM2P49643 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PRIM2P49643 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PRIM2P49643 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PRIM2P49643 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PRIM2P49643 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PRIM2P49643 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.89■□□□□ 0.45
PRIM2P49643 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.89■□□□□ 0.45
PRIM2P49643 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
PRIM2P49643 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PRIM2P49643 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
PRIM2P49643 C1QBPP2-201ENST00000528754 825 ntBASIC17.89■□□□□ 0.45
PRIM2P49643 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.89■□□□□ 0.45
PRIM2P49643 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PRIM2P49643 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PRIM2P49643 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PRIM2P49643 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.89■□□□□ 0.45
PRIM2P49643 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PRIM2P49643 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
PRIM2P49643 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PRIM2P49643 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms