Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CENPFP49454 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CENPFP49454 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.22■□□□□ 0.99
CENPFP49454 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
CENPFP49454 LBH-204ENST00000406087 559 ntTSL 4 BASIC21.22■□□□□ 0.99
CENPFP49454 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC21.22■□□□□ 0.99
CENPFP49454 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC21.22■□□□□ 0.99
CENPFP49454 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC21.22■□□□□ 0.99
CENPFP49454 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC21.22■□□□□ 0.99
CENPFP49454 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.22■□□□□ 0.99
CENPFP49454 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
CENPFP49454 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CENPFP49454 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CENPFP49454 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CENPFP49454 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.22■□□□□ 0.99
CENPFP49454 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.22■□□□□ 0.99
CENPFP49454 AL592071.1-201ENST00000611956 408 ntBASIC21.22■□□□□ 0.99
CENPFP49454 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CENPFP49454 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CENPFP49454 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CENPFP49454 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC21.22■□□□□ 0.99
CENPFP49454 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CENPFP49454 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CENPFP49454 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CENPFP49454 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.22■□□□□ 0.99
CENPFP49454 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CENPFP49454 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CENPFP49454 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CENPFP49454 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CENPFP49454 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CENPFP49454 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CENPFP49454 LINC01711-201ENST00000598340 967 ntBASIC21.21■□□□□ 0.99
CENPFP49454 AL049840.3-201ENST00000602669 611 ntBASIC21.21■□□□□ 0.99
CENPFP49454 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC21.21■□□□□ 0.99
CENPFP49454 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
CENPFP49454 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
CENPFP49454 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CENPFP49454 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CENPFP49454 EMD-201ENST00000369835 966 ntTSL 3 BASIC21.21■□□□□ 0.99
CENPFP49454 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.21■□□□□ 0.99
CENPFP49454 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC21.21■□□□□ 0.99
CENPFP49454 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC21.21■□□□□ 0.99
CENPFP49454 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21.21■□□□□ 0.99
CENPFP49454 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CENPFP49454 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CENPFP49454 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CENPFP49454 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC21.21■□□□□ 0.99
CENPFP49454 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CENPFP49454 GPX1P2-201ENST00000429271 606 ntBASIC21.21■□□□□ 0.99
CENPFP49454 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC21.21■□□□□ 0.99
CENPFP49454 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC21.21■□□□□ 0.99
CENPFP49454 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CENPFP49454 AC008556.1-201ENST00000610908 2040 ntBASIC21.21■□□□□ 0.99
CENPFP49454 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC21.2■□□□□ 0.99
CENPFP49454 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CENPFP49454 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.2■□□□□ 0.98
CENPFP49454 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CENPFP49454 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CENPFP49454 CSF3-203ENST00000394148 622 ntTSL 3 BASIC21.2■□□□□ 0.98
CENPFP49454 BNIP3P18-201ENST00000593976 575 ntBASIC21.2■□□□□ 0.98
CENPFP49454 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.2■□□□□ 0.98
CENPFP49454 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.2■□□□□ 0.98
CENPFP49454 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.2■□□□□ 0.98
CENPFP49454 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CENPFP49454 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CENPFP49454 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CENPFP49454 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
CENPFP49454 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CENPFP49454 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CENPFP49454 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.2■□□□□ 0.98
CENPFP49454 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CENPFP49454 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC21.19■□□□□ 0.98
CENPFP49454 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
CENPFP49454 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC21.19■□□□□ 0.98
CENPFP49454 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC21.19■□□□□ 0.98
CENPFP49454 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CENPFP49454 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CENPFP49454 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CENPFP49454 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CENPFP49454 HNRNPDP1-201ENST00000439535 754 ntBASIC21.19■□□□□ 0.98
CENPFP49454 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC21.19■□□□□ 0.98
CENPFP49454 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC21.19■□□□□ 0.98
CENPFP49454 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CENPFP49454 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CENPFP49454 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CENPFP49454 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC21.19■□□□□ 0.98
CENPFP49454 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CENPFP49454 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC21.19■□□□□ 0.98
CENPFP49454 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CENPFP49454 AL691403.2-201ENST00000618460 490 ntBASIC21.19■□□□□ 0.98
CENPFP49454 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CENPFP49454 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CENPFP49454 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CENPFP49454 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CENPFP49454 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CENPFP49454 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC21.18■□□□□ 0.98
CENPFP49454 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CENPFP49454 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CENPFP49454 HNRNPA1P28-201ENST00000424481 961 ntBASIC21.18■□□□□ 0.98
CENPFP49454 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms