Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BRCC3P46736 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BRCC3P46736 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
BRCC3P46736 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BRCC3P46736 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
BRCC3P46736 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.03■□□□□ 0.8
BRCC3P46736 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
BRCC3P46736 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BRCC3P46736 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.03■□□□□ 0.8
BRCC3P46736 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
BRCC3P46736 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
BRCC3P46736 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
BRCC3P46736 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.03■□□□□ 0.8
BRCC3P46736 AC093458.2-201ENST00000623150 629 ntBASIC20.03■□□□□ 0.8
BRCC3P46736 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BRCC3P46736 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.03■□□□□ 0.8
BRCC3P46736 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
BRCC3P46736 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.03■□□□□ 0.8
BRCC3P46736 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
BRCC3P46736 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
BRCC3P46736 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.03■□□□□ 0.8
BRCC3P46736 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BRCC3P46736 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
BRCC3P46736 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
BRCC3P46736 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
BRCC3P46736 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.02■□□□□ 0.8
BRCC3P46736 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
BRCC3P46736 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
BRCC3P46736 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
BRCC3P46736 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
BRCC3P46736 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.02■□□□□ 0.8
BRCC3P46736 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.02■□□□□ 0.8
BRCC3P46736 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.02■□□□□ 0.8
BRCC3P46736 AC034232.1-201ENST00000506026 1064 ntBASIC20.02■□□□□ 0.8
BRCC3P46736 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.02■□□□□ 0.8
BRCC3P46736 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.02■□□□□ 0.8
BRCC3P46736 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.02■□□□□ 0.8
BRCC3P46736 AL157888.1-201ENST00000631930 593 ntBASIC20.02■□□□□ 0.8
BRCC3P46736 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BRCC3P46736 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.02■□□□□ 0.8
BRCC3P46736 SLC25A24-204ENST00000569674 2357 ntBASIC20.02■□□□□ 0.8
BRCC3P46736 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.02■□□□□ 0.79
BRCC3P46736 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.02■□□□□ 0.79
BRCC3P46736 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BRCC3P46736 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BRCC3P46736 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.01■□□□□ 0.79
BRCC3P46736 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BRCC3P46736 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BRCC3P46736 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BRCC3P46736 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
BRCC3P46736 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.01■□□□□ 0.79
BRCC3P46736 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.01■□□□□ 0.79
BRCC3P46736 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.01■□□□□ 0.79
BRCC3P46736 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.01■□□□□ 0.79
BRCC3P46736 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BRCC3P46736 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.01■□□□□ 0.79
BRCC3P46736 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.01■□□□□ 0.79
BRCC3P46736 AC079602.3-201ENST00000623931 403 ntBASIC20.01■□□□□ 0.79
BRCC3P46736 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.01■□□□□ 0.79
BRCC3P46736 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.01■□□□□ 0.79
BRCC3P46736 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.01■□□□□ 0.79
BRCC3P46736 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.01■□□□□ 0.79
BRCC3P46736 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
BRCC3P46736 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
BRCC3P46736 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BRCC3P46736 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
BRCC3P46736 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
BRCC3P46736 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BRCC3P46736 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20■□□□□ 0.79
BRCC3P46736 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BRCC3P46736 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20■□□□□ 0.79
BRCC3P46736 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BRCC3P46736 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BRCC3P46736 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BRCC3P46736 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
BRCC3P46736 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BRCC3P46736 KRT18P23-201ENST00000435622 1283 ntBASIC20■□□□□ 0.79
BRCC3P46736 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20■□□□□ 0.79
BRCC3P46736 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20■□□□□ 0.79
BRCC3P46736 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
BRCC3P46736 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
BRCC3P46736 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
BRCC3P46736 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20■□□□□ 0.79
BRCC3P46736 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BRCC3P46736 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20■□□□□ 0.79
BRCC3P46736 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20■□□□□ 0.79
BRCC3P46736 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
BRCC3P46736 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20■□□□□ 0.79
BRCC3P46736 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20■□□□□ 0.79
BRCC3P46736 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20■□□□□ 0.79
BRCC3P46736 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BRCC3P46736 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BRCC3P46736 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
BRCC3P46736 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
BRCC3P46736 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
BRCC3P46736 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BRCC3P46736 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BRCC3P46736 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
BRCC3P46736 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BRCC3P46736 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms