Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.27■□□□□ 0.51
HNF4AP41235 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HNF4AP41235 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
HNF4AP41235 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.51
HNF4AP41235 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HNF4AP41235 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HNF4AP41235 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HNF4AP41235 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.26■□□□□ 0.51
HNF4AP41235 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HNF4AP41235 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
HNF4AP41235 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.26■□□□□ 0.51
HNF4AP41235 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
HNF4AP41235 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HNF4AP41235 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.26■□□□□ 0.51
HNF4AP41235 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HNF4AP41235 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HNF4AP41235 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HNF4AP41235 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
HNF4AP41235 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
HNF4AP41235 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
HNF4AP41235 AC008040.2-201ENST00000461049 708 ntBASIC18.26■□□□□ 0.51
HNF4AP41235 NUDT16P1-203ENST00000513809 620 ntBASIC18.26■□□□□ 0.51
HNF4AP41235 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.26■□□□□ 0.51
HNF4AP41235 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HNF4AP41235 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.26■□□□□ 0.51
HNF4AP41235 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.26■□□□□ 0.51
HNF4AP41235 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.26■□□□□ 0.51
HNF4AP41235 AC130371.2-201ENST00000619443 611 ntBASIC18.26■□□□□ 0.51
HNF4AP41235 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
HNF4AP41235 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
HNF4AP41235 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HNF4AP41235 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HNF4AP41235 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HNF4AP41235 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HNF4AP41235 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HNF4AP41235 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HNF4AP41235 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HNF4AP41235 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
HNF4AP41235 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HNF4AP41235 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HNF4AP41235 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
HNF4AP41235 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
HNF4AP41235 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
HNF4AP41235 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HNF4AP41235 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HNF4AP41235 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HNF4AP41235 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.25■□□□□ 0.51
HNF4AP41235 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
HNF4AP41235 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
HNF4AP41235 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HNF4AP41235 AL512353.2-201ENST00000448759 1962 ntBASIC18.25■□□□□ 0.51
HNF4AP41235 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.25■□□□□ 0.51
HNF4AP41235 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
HNF4AP41235 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
HNF4AP41235 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.25■□□□□ 0.51
HNF4AP41235 B3GAT3P1-201ENST00000471720 806 ntBASIC18.25■□□□□ 0.51
HNF4AP41235 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.25■□□□□ 0.51
HNF4AP41235 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.25■□□□□ 0.51
HNF4AP41235 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.25■□□□□ 0.51
HNF4AP41235 AP003071.4-201ENST00000562276 1284 ntBASIC18.25■□□□□ 0.51
HNF4AP41235 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.25■□□□□ 0.51
HNF4AP41235 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.25■□□□□ 0.51
HNF4AP41235 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HNF4AP41235 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HNF4AP41235 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HNF4AP41235 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
HNF4AP41235 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.25■□□□□ 0.51
HNF4AP41235 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.25■□□□□ 0.51
HNF4AP41235 FSCN1P1-201ENST00000568912 1481 ntBASIC18.25■□□□□ 0.51
HNF4AP41235 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
HNF4AP41235 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.25■□□□□ 0.51
HNF4AP41235 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
HNF4AP41235 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HNF4AP41235 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
HNF4AP41235 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.25■□□□□ 0.51
HNF4AP41235 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.25■□□□□ 0.51
HNF4AP41235 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
HNF4AP41235 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
HNF4AP41235 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HNF4AP41235 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
HNF4AP41235 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.24■□□□□ 0.51
HNF4AP41235 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
HNF4AP41235 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HNF4AP41235 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HNF4AP41235 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HNF4AP41235 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HNF4AP41235 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
HNF4AP41235 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HNF4AP41235 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HNF4AP41235 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.24■□□□□ 0.51
HNF4AP41235 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
HNF4AP41235 FAM207BP-201ENST00000447172 505 ntBASIC18.24■□□□□ 0.51
HNF4AP41235 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.24■□□□□ 0.51
HNF4AP41235 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.24■□□□□ 0.51
HNF4AP41235 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.24■□□□□ 0.51
HNF4AP41235 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.24■□□□□ 0.51
HNF4AP41235 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.24■□□□□ 0.51
HNF4AP41235 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HNF4AP41235 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.24■□□□□ 0.51
HNF4AP41235 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms