Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
PCK1P35558 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PCK1P35558 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
PCK1P35558 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.81■□□□□ 0.76
PCK1P35558 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCK1P35558 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCK1P35558 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCK1P35558 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCK1P35558 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCK1P35558 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCK1P35558 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.81■□□□□ 0.76
PCK1P35558 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PCK1P35558 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCK1P35558 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.81■□□□□ 0.76
PCK1P35558 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCK1P35558 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.81■□□□□ 0.76
PCK1P35558 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PCK1P35558 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.81■□□□□ 0.76
PCK1P35558 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
PCK1P35558 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCK1P35558 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCK1P35558 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCK1P35558 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
PCK1P35558 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PCK1P35558 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
PCK1P35558 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PCK1P35558 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
PCK1P35558 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCK1P35558 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCK1P35558 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PCK1P35558 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PCK1P35558 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.81■□□□□ 0.76
PCK1P35558 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.81■□□□□ 0.76
PCK1P35558 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCK1P35558 AL031598.1-201ENST00000561511 1773 ntBASIC19.8■□□□□ 0.76
PCK1P35558 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCK1P35558 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCK1P35558 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCK1P35558 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCK1P35558 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCK1P35558 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.8■□□□□ 0.76
PCK1P35558 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PCK1P35558 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCK1P35558 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.8■□□□□ 0.76
PCK1P35558 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCK1P35558 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PCK1P35558 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.8■□□□□ 0.76
PCK1P35558 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.8■□□□□ 0.76
PCK1P35558 AC011298.2-201ENST00000617989 482 ntBASIC19.8■□□□□ 0.76
PCK1P35558 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PCK1P35558 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
PCK1P35558 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
PCK1P35558 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
PCK1P35558 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCK1P35558 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCK1P35558 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCK1P35558 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCK1P35558 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCK1P35558 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCK1P35558 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCK1P35558 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCK1P35558 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
PCK1P35558 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCK1P35558 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.79■□□□□ 0.76
PCK1P35558 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCK1P35558 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCK1P35558 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCK1P35558 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
PCK1P35558 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
PCK1P35558 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCK1P35558 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCK1P35558 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
PCK1P35558 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.79■□□□□ 0.76
PCK1P35558 AL158047.1-201ENST00000445918 881 ntBASIC19.79■□□□□ 0.76
PCK1P35558 AC008040.2-201ENST00000461049 708 ntBASIC19.79■□□□□ 0.76
PCK1P35558 AC011506.1-201ENST00000474329 610 ntBASIC19.79■□□□□ 0.76
PCK1P35558 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.79■□□□□ 0.76
PCK1P35558 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.79■□□□□ 0.76
PCK1P35558 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCK1P35558 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCK1P35558 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCK1P35558 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCK1P35558 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCK1P35558 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCK1P35558 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
PCK1P35558 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCK1P35558 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
PCK1P35558 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.78■□□□□ 0.76
PCK1P35558 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCK1P35558 Z98044.1-201ENST00000632503 1764 ntBASIC19.78■□□□□ 0.76
PCK1P35558 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCK1P35558 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PCK1P35558 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCK1P35558 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCK1P35558 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCK1P35558 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
PCK1P35558 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
PCK1P35558 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PCK1P35558 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.78■□□□□ 0.76
PCK1P35558 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms