Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.56■□□□□ 0.88
HOXC8P31273 AC111152.3-201ENST00000569699 673 ntBASIC20.56■□□□□ 0.88
HOXC8P31273 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.56■□□□□ 0.88
HOXC8P31273 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HOXC8P31273 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.56■□□□□ 0.88
HOXC8P31273 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.56■□□□□ 0.88
HOXC8P31273 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HOXC8P31273 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.56■□□□□ 0.88
HOXC8P31273 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
HOXC8P31273 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXC8P31273 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXC8P31273 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.55■□□□□ 0.88
HOXC8P31273 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HOXC8P31273 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.55■□□□□ 0.88
HOXC8P31273 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
HOXC8P31273 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXC8P31273 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
HOXC8P31273 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXC8P31273 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.55■□□□□ 0.88
HOXC8P31273 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXC8P31273 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXC8P31273 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HOXC8P31273 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
HOXC8P31273 TSPY19P-201ENST00000418461 509 ntBASIC20.55■□□□□ 0.88
HOXC8P31273 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.55■□□□□ 0.88
HOXC8P31273 AC246785.2-201ENST00000432512 513 ntBASIC20.55■□□□□ 0.88
HOXC8P31273 TSPY18P-201ENST00000441642 509 ntBASIC20.55■□□□□ 0.88
HOXC8P31273 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.55■□□□□ 0.88
HOXC8P31273 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HOXC8P31273 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
HOXC8P31273 AC005332.3-201ENST00000589904 676 ntBASIC20.55■□□□□ 0.88
HOXC8P31273 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXC8P31273 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
HOXC8P31273 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.55■□□□□ 0.88
HOXC8P31273 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
HOXC8P31273 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXC8P31273 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HOXC8P31273 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HOXC8P31273 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.54■□□□□ 0.88
HOXC8P31273 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXC8P31273 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXC8P31273 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.54■□□□□ 0.88
HOXC8P31273 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.54■□□□□ 0.88
HOXC8P31273 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXC8P31273 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXC8P31273 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXC8P31273 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.54■□□□□ 0.88
HOXC8P31273 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
HOXC8P31273 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HOXC8P31273 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXC8P31273 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.54■□□□□ 0.88
HOXC8P31273 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.54■□□□□ 0.88
HOXC8P31273 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HOXC8P31273 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXC8P31273 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
HOXC8P31273 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXC8P31273 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.53■□□□□ 0.88
HOXC8P31273 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.53■□□□□ 0.88
HOXC8P31273 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HOXC8P31273 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.53■□□□□ 0.88
HOXC8P31273 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HOXC8P31273 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.53■□□□□ 0.88
HOXC8P31273 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HOXC8P31273 FDX1P1-201ENST00000449115 551 ntBASIC20.53■□□□□ 0.88
HOXC8P31273 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.53■□□□□ 0.88
HOXC8P31273 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
HOXC8P31273 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.53■□□□□ 0.88
HOXC8P31273 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HOXC8P31273 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.53■□□□□ 0.88
HOXC8P31273 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
HOXC8P31273 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.52■□□□□ 0.88
HOXC8P31273 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.52■□□□□ 0.88
HOXC8P31273 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.52■□□□□ 0.88
HOXC8P31273 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
HOXC8P31273 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HOXC8P31273 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HOXC8P31273 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HOXC8P31273 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.52■□□□□ 0.88
HOXC8P31273 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.52■□□□□ 0.88
HOXC8P31273 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.52■□□□□ 0.88
HOXC8P31273 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HOXC8P31273 FAAHP1-202ENST00000446499 1238 ntBASIC20.52■□□□□ 0.88
HOXC8P31273 KRT17P6-201ENST00000453795 1220 ntBASIC20.52■□□□□ 0.88
HOXC8P31273 AP003733.1-201ENST00000491725 852 ntBASIC20.52■□□□□ 0.88
HOXC8P31273 AC012615.1-201ENST00000565797 1299 ntBASIC20.52■□□□□ 0.88
HOXC8P31273 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.52■□□□□ 0.88
HOXC8P31273 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HOXC8P31273 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.52■□□□□ 0.88
HOXC8P31273 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HOXC8P31273 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
HOXC8P31273 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HOXC8P31273 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.52■□□□□ 0.87
HOXC8P31273 AL158211.5-201ENST00000623583 2518 ntBASIC20.52■□□□□ 0.87
HOXC8P31273 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXC8P31273 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXC8P31273 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXC8P31273 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HOXC8P31273 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.51■□□□□ 0.87
HOXC8P31273 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXC8P31273 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms