Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
HOXA6P31267 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
HOXA6P31267 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HOXA6P31267 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HOXA6P31267 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HOXA6P31267 KRT18P67-201ENST00000432816 1264 ntBASIC18.58■□□□□ 0.56
HOXA6P31267 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HOXA6P31267 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.58■□□□□ 0.56
HOXA6P31267 AP005901.3-202ENST00000581653 237 ntBASIC18.58■□□□□ 0.56
HOXA6P31267 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.58■□□□□ 0.56
HOXA6P31267 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.58■□□□□ 0.56
HOXA6P31267 LINC00565-201ENST00000562710 2331 ntBASIC18.58■□□□□ 0.56
HOXA6P31267 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.58■□□□□ 0.56
HOXA6P31267 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HOXA6P31267 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
HOXA6P31267 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
HOXA6P31267 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HOXA6P31267 RNF165-205ENST00000588679 2904 ntBASIC18.57■□□□□ 0.56
HOXA6P31267 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HOXA6P31267 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HOXA6P31267 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
HOXA6P31267 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
HOXA6P31267 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.57■□□□□ 0.56
HOXA6P31267 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HOXA6P31267 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HOXA6P31267 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.57■□□□□ 0.56
HOXA6P31267 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
HOXA6P31267 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HOXA6P31267 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HOXA6P31267 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
HOXA6P31267 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HOXA6P31267 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HOXA6P31267 FAM197Y8-203ENST00000450145 560 ntBASIC18.57■□□□□ 0.56
HOXA6P31267 RNPS1P1-201ENST00000507437 918 ntBASIC18.57■□□□□ 0.56
HOXA6P31267 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HOXA6P31267 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.57■□□□□ 0.56
HOXA6P31267 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.57■□□□□ 0.56
HOXA6P31267 AC009065.1-201ENST00000564055 1225 ntBASIC18.57■□□□□ 0.56
HOXA6P31267 KRT8P32-201ENST00000512863 1461 ntBASIC18.57■□□□□ 0.56
HOXA6P31267 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.57■□□□□ 0.56
HOXA6P31267 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
HOXA6P31267 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.57■□□□□ 0.56
HOXA6P31267 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HOXA6P31267 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.57■□□□□ 0.56
HOXA6P31267 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
HOXA6P31267 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
HOXA6P31267 AL353692.3-201ENST00000407031 1396 ntBASIC18.56■□□□□ 0.56
HOXA6P31267 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HOXA6P31267 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HOXA6P31267 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HOXA6P31267 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HOXA6P31267 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HOXA6P31267 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.56■□□□□ 0.56
HOXA6P31267 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.56■□□□□ 0.56
HOXA6P31267 NUS1P2-201ENST00000417358 873 ntBASIC18.56■□□□□ 0.56
HOXA6P31267 AL031284.1-201ENST00000419297 478 ntBASIC18.56■□□□□ 0.56
HOXA6P31267 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.56■□□□□ 0.56
HOXA6P31267 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.56■□□□□ 0.56
HOXA6P31267 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HOXA6P31267 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.56■□□□□ 0.56
HOXA6P31267 AC011840.4-201ENST00000578471 627 ntBASIC18.56■□□□□ 0.56
HOXA6P31267 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HOXA6P31267 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HOXA6P31267 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HOXA6P31267 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
HOXA6P31267 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HOXA6P31267 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
HOXA6P31267 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.55■□□□□ 0.56
HOXA6P31267 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HOXA6P31267 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HOXA6P31267 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.55■□□□□ 0.56
HOXA6P31267 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
HOXA6P31267 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HOXA6P31267 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.55■□□□□ 0.56
HOXA6P31267 MINOS1P3-201ENST00000457048 203 ntBASIC18.55■□□□□ 0.56
HOXA6P31267 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.55■□□□□ 0.56
HOXA6P31267 AF186996.4-201ENST00000467186 377 ntBASIC18.55■□□□□ 0.56
HOXA6P31267 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.55■□□□□ 0.56
HOXA6P31267 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.55■□□□□ 0.56
HOXA6P31267 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
HOXA6P31267 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HOXA6P31267 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HOXA6P31267 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HOXA6P31267 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.54■□□□□ 0.56
HOXA6P31267 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HOXA6P31267 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
HOXA6P31267 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.54■□□□□ 0.56
HOXA6P31267 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HOXA6P31267 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HOXA6P31267 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.54■□□□□ 0.56
HOXA6P31267 AC093909.1-201ENST00000504731 1122 ntBASIC18.54■□□□□ 0.56
HOXA6P31267 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.54■□□□□ 0.56
HOXA6P31267 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HOXA6P31267 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
HOXA6P31267 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.54■□□□□ 0.56
HOXA6P31267 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.54■□□□□ 0.56
HOXA6P31267 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.54■□□□□ 0.56
HOXA6P31267 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
HOXA6P31267 AC106730.1-201ENST00000566722 1090 ntBASIC18.54■□□□□ 0.56
HOXA6P31267 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms