Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 AC087388.1-201ENST00000571370 1112 ntBASIC17.08■□□□□ 0.32
GDF1P27539 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.08■□□□□ 0.32
GDF1P27539 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.08■□□□□ 0.32
GDF1P27539 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GDF1P27539 AC011558.1-201ENST00000623459 338 ntBASIC17.08■□□□□ 0.32
GDF1P27539 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
GDF1P27539 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
GDF1P27539 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
GDF1P27539 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GDF1P27539 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GDF1P27539 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.08■□□□□ 0.32
GDF1P27539 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GDF1P27539 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.07■□□□□ 0.32
GDF1P27539 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
GDF1P27539 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.07■□□□□ 0.32
GDF1P27539 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GDF1P27539 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GDF1P27539 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.07■□□□□ 0.32
GDF1P27539 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.07■□□□□ 0.32
GDF1P27539 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.07■□□□□ 0.32
GDF1P27539 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
GDF1P27539 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.07■□□□□ 0.32
GDF1P27539 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GDF1P27539 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.07■□□□□ 0.32
GDF1P27539 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.07■□□□□ 0.32
GDF1P27539 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.07■□□□□ 0.32
GDF1P27539 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
GDF1P27539 NEK4P2-201ENST00000580004 1012 ntBASIC17.07■□□□□ 0.32
GDF1P27539 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.07■□□□□ 0.32
GDF1P27539 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GDF1P27539 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.07■□□□□ 0.32
GDF1P27539 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
GDF1P27539 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GDF1P27539 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GDF1P27539 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GDF1P27539 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GDF1P27539 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
GDF1P27539 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GDF1P27539 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.06■□□□□ 0.32
GDF1P27539 RCC2P3-201ENST00000418112 1537 ntBASIC17.06■□□□□ 0.32
GDF1P27539 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GDF1P27539 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.06■□□□□ 0.32
GDF1P27539 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
GDF1P27539 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GDF1P27539 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
GDF1P27539 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
GDF1P27539 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.06■□□□□ 0.32
GDF1P27539 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.06■□□□□ 0.32
GDF1P27539 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GDF1P27539 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.06■□□□□ 0.32
GDF1P27539 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GDF1P27539 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.06■□□□□ 0.32
GDF1P27539 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GDF1P27539 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GDF1P27539 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GDF1P27539 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GDF1P27539 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.06■□□□□ 0.32
GDF1P27539 MIR3180-5-201ENST00000583743 153 ntBASIC17.06■□□□□ 0.32
GDF1P27539 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
GDF1P27539 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GDF1P27539 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.06■□□□□ 0.32
GDF1P27539 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.06■□□□□ 0.32
GDF1P27539 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
GDF1P27539 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
GDF1P27539 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
GDF1P27539 AL512353.2-201ENST00000448759 1962 ntBASIC17.06■□□□□ 0.32
GDF1P27539 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.06■□□□□ 0.32
GDF1P27539 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
GDF1P27539 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.05■□□□□ 0.32
GDF1P27539 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.05■□□□□ 0.32
GDF1P27539 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GDF1P27539 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GDF1P27539 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GDF1P27539 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.05■□□□□ 0.32
GDF1P27539 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GDF1P27539 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.05■□□□□ 0.32
GDF1P27539 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GDF1P27539 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.05■□□□□ 0.32
GDF1P27539 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.05■□□□□ 0.32
GDF1P27539 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.05■□□□□ 0.32
GDF1P27539 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.05■□□□□ 0.32
GDF1P27539 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.05■□□□□ 0.32
GDF1P27539 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GDF1P27539 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.05■□□□□ 0.32
GDF1P27539 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.05■□□□□ 0.32
GDF1P27539 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.05■□□□□ 0.32
GDF1P27539 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.05■□□□□ 0.32
GDF1P27539 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GDF1P27539 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GDF1P27539 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GDF1P27539 AL441883.1-201ENST00000566170 1045 ntBASIC17.05■□□□□ 0.32
GDF1P27539 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
GDF1P27539 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.05■□□□□ 0.32
GDF1P27539 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.05■□□□□ 0.32
GDF1P27539 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GDF1P27539 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.05■□□□□ 0.32
GDF1P27539 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GDF1P27539 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.05■□□□□ 0.32
GDF1P27539 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
GDF1P27539 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms