Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.64■□□□□ 0.25
MSR1P21757 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.64■□□□□ 0.25
MSR1P21757 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.64■□□□□ 0.25
MSR1P21757 AP000692.2-201ENST00000608391 879 ntBASIC16.64■□□□□ 0.25
MSR1P21757 DGCR10-201ENST00000609839 495 ntBASIC16.64■□□□□ 0.25
MSR1P21757 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MSR1P21757 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MSR1P21757 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MSR1P21757 AL512353.2-201ENST00000448759 1962 ntBASIC16.64■□□□□ 0.25
MSR1P21757 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
MSR1P21757 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MSR1P21757 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.64■□□□□ 0.25
MSR1P21757 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MSR1P21757 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MSR1P21757 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.63■□□□□ 0.25
MSR1P21757 KRT8P3-201ENST00000519669 1449 ntBASIC16.63■□□□□ 0.25
MSR1P21757 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MSR1P21757 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MSR1P21757 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.63■□□□□ 0.25
MSR1P21757 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MSR1P21757 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MSR1P21757 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.63■□□□□ 0.25
MSR1P21757 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MSR1P21757 MIR718-201ENST00000390190 70 ntBASIC16.63■□□□□ 0.25
MSR1P21757 AC116562.2-201ENST00000507042 360 ntBASIC16.63■□□□□ 0.25
MSR1P21757 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.63■□□□□ 0.25
MSR1P21757 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.63■□□□□ 0.25
MSR1P21757 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.63■□□□□ 0.25
MSR1P21757 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
MSR1P21757 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.63■□□□□ 0.25
MSR1P21757 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.63■□□□□ 0.25
MSR1P21757 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.63■□□□□ 0.25
MSR1P21757 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.63■□□□□ 0.25
MSR1P21757 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
MSR1P21757 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MSR1P21757 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.63■□□□□ 0.25
MSR1P21757 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.63■□□□□ 0.25
MSR1P21757 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MSR1P21757 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MSR1P21757 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.63■□□□□ 0.25
MSR1P21757 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
MSR1P21757 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
MSR1P21757 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MSR1P21757 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.63■□□□□ 0.25
MSR1P21757 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MSR1P21757 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MSR1P21757 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
MSR1P21757 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MSR1P21757 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
MSR1P21757 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MSR1P21757 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.62■□□□□ 0.25
MSR1P21757 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.62■□□□□ 0.25
MSR1P21757 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MSR1P21757 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
MSR1P21757 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
MSR1P21757 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.62■□□□□ 0.25
MSR1P21757 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
MSR1P21757 AL355355.2-201ENST00000442321 338 ntBASIC16.62■□□□□ 0.25
MSR1P21757 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.62■□□□□ 0.25
MSR1P21757 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.62■□□□□ 0.25
MSR1P21757 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.62■□□□□ 0.25
MSR1P21757 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.62■□□□□ 0.25
MSR1P21757 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MSR1P21757 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MSR1P21757 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MSR1P21757 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
MSR1P21757 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
MSR1P21757 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MSR1P21757 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MSR1P21757 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MSR1P21757 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MSR1P21757 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MSR1P21757 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.62■□□□□ 0.25
MSR1P21757 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.62■□□□□ 0.25
MSR1P21757 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.62■□□□□ 0.25
MSR1P21757 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
MSR1P21757 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.61■□□□□ 0.25
MSR1P21757 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MSR1P21757 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
MSR1P21757 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
MSR1P21757 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MSR1P21757 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
MSR1P21757 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.61■□□□□ 0.25
MSR1P21757 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.61■□□□□ 0.25
MSR1P21757 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
MSR1P21757 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MSR1P21757 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MSR1P21757 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MSR1P21757 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MSR1P21757 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.61■□□□□ 0.25
MSR1P21757 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MSR1P21757 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
MSR1P21757 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.61■□□□□ 0.25
MSR1P21757 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MSR1P21757 AC008550.1-201ENST00000511500 884 ntBASIC16.61■□□□□ 0.25
MSR1P21757 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MSR1P21757 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
MSR1P21757 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MSR1P21757 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
MSR1P21757 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms