Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC32.26■■■□□ 2.75
CFTRP13569 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC32.26■■■□□ 2.75
CFTRP13569 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
CFTRP13569 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC32.25■■■□□ 2.75
CFTRP13569 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
CFTRP13569 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC32.25■■■□□ 2.75
CFTRP13569 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC32.25■■■□□ 2.75
CFTRP13569 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC32.25■■■□□ 2.75
CFTRP13569 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC32.25■■■□□ 2.75
CFTRP13569 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC32.25■■■□□ 2.75
CFTRP13569 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
CFTRP13569 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC32.25■■■□□ 2.75
CFTRP13569 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC32.25■■■□□ 2.75
CFTRP13569 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
CFTRP13569 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
CFTRP13569 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC32.24■■■□□ 2.75
CFTRP13569 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC32.24■■■□□ 2.75
CFTRP13569 AC034236.2-201ENST00000606662 1610 ntBASIC32.24■■■□□ 2.75
CFTRP13569 HMGN1P19-201ENST00000436976 333 ntBASIC32.24■■■□□ 2.75
CFTRP13569 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC32.24■■■□□ 2.75
CFTRP13569 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC32.24■■■□□ 2.75
CFTRP13569 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC32.24■■■□□ 2.75
CFTRP13569 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC32.24■■■□□ 2.75
CFTRP13569 HOTTIP_1.1-201ENST00000620415 57 ntBASIC32.24■■■□□ 2.75
CFTRP13569 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
CFTRP13569 KRT8P32-201ENST00000512863 1461 ntBASIC32.24■■■□□ 2.75
CFTRP13569 KATNBL1P6-202ENST00000562413 1466 ntBASIC32.24■■■□□ 2.75
CFTRP13569 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC32.24■■■□□ 2.75
CFTRP13569 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
CFTRP13569 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
CFTRP13569 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
CFTRP13569 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC32.24■■■□□ 2.75
CFTRP13569 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC32.24■■■□□ 2.75
CFTRP13569 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC32.23■■■□□ 2.75
CFTRP13569 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
CFTRP13569 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
CFTRP13569 FGFR3P6-201ENST00000457012 610 ntBASIC32.23■■■□□ 2.75
CFTRP13569 AC145285.3-201ENST00000564603 959 ntBASIC32.23■■■□□ 2.75
CFTRP13569 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC32.23■■■□□ 2.75
CFTRP13569 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC32.23■■■□□ 2.75
CFTRP13569 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC32.23■■■□□ 2.75
CFTRP13569 AL391422.3-201ENST00000603791 2761 ntBASIC32.23■■■□□ 2.75
CFTRP13569 TCF3P1-201ENST00000423021 1937 ntBASIC32.23■■■□□ 2.75
CFTRP13569 TP73-202ENST00000354437 2140 ntTSL 5 BASIC32.23■■■□□ 2.75
CFTRP13569 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC32.23■■■□□ 2.75
CFTRP13569 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
CFTRP13569 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC32.23■■■□□ 2.75
CFTRP13569 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC32.23■■■□□ 2.75
CFTRP13569 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC32.23■■■□□ 2.75
CFTRP13569 FAM215A-202ENST00000632077 792 ntBASIC32.23■■■□□ 2.75
CFTRP13569 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC32.22■■■□□ 2.75
CFTRP13569 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
CFTRP13569 AC099778.1-201ENST00000568593 1911 ntBASIC32.22■■■□□ 2.75
CFTRP13569 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC32.22■■■□□ 2.75
CFTRP13569 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC32.22■■■□□ 2.75
CFTRP13569 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
CFTRP13569 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
CFTRP13569 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC32.22■■■□□ 2.75
CFTRP13569 LINC00565-201ENST00000562710 2331 ntBASIC32.22■■■□□ 2.75
CFTRP13569 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC32.21■■■□□ 2.75
CFTRP13569 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC32.21■■■□□ 2.75
CFTRP13569 AC006333.2-201ENST00000607957 2099 ntBASIC32.21■■■□□ 2.75
CFTRP13569 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC32.21■■■□□ 2.75
CFTRP13569 GABARAPL3-202ENST00000624044 1851 ntBASIC32.21■■■□□ 2.75
CFTRP13569 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC32.21■■■□□ 2.75
CFTRP13569 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
CFTRP13569 MINOS1P3-201ENST00000457048 203 ntBASIC32.21■■■□□ 2.75
CFTRP13569 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC32.21■■■□□ 2.75
CFTRP13569 AC073648.2-201ENST00000510116 352 ntBASIC32.21■■■□□ 2.75
CFTRP13569 REEP1-209ENST00000541910 969 ntTSL 2 BASIC32.21■■■□□ 2.75
CFTRP13569 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
CFTRP13569 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
CFTRP13569 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
CFTRP13569 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC32.2■■■□□ 2.75
CFTRP13569 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
CFTRP13569 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
CFTRP13569 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC32.2■■■□□ 2.75
CFTRP13569 HNRNPDP1-201ENST00000439535 754 ntBASIC32.2■■■□□ 2.75
CFTRP13569 AL355877.3-201ENST00000622820 899 ntBASIC32.2■■■□□ 2.75
CFTRP13569 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
CFTRP13569 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC32.2■■■□□ 2.74
CFTRP13569 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC32.2■■■□□ 2.74
CFTRP13569 CYP51A1P1-201ENST00000492267 1507 ntBASIC32.2■■■□□ 2.74
CFTRP13569 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC32.2■■■□□ 2.74
CFTRP13569 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC32.2■■■□□ 2.74
CFTRP13569 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC32.19■■■□□ 2.74
CFTRP13569 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
CFTRP13569 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC32.19■■■□□ 2.74
CFTRP13569 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
CFTRP13569 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC32.19■■■□□ 2.74
CFTRP13569 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC32.19■■■□□ 2.74
CFTRP13569 AC096582.2-201ENST00000510860 516 ntBASIC32.19■■■□□ 2.74
CFTRP13569 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC32.19■■■□□ 2.74
CFTRP13569 IRF8-202ENST00000562492 946 ntTSL 3 BASIC32.19■■■□□ 2.74
CFTRP13569 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC32.19■■■□□ 2.74
CFTRP13569 MIR5100-201ENST00000579544 119 ntBASIC32.19■■■□□ 2.74
CFTRP13569 TERC-201ENST00000602385 541 ntBASIC32.19■■■□□ 2.74
CFTRP13569 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
CFTRP13569 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC32.19■■■□□ 2.74
CFTRP13569 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC32.19■■■□□ 2.74
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms