Protein–RNA interactions for Protein: P11532

DMD, Dystrophin, humanhuman

Predictions only

Length 3,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DMDP11532 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
DMDP11532 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.58■□□□□ 0.56
DMDP11532 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
DMDP11532 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DMDP11532 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
DMDP11532 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.57■□□□□ 0.56
DMDP11532 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.57■□□□□ 0.56
DMDP11532 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DMDP11532 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
DMDP11532 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.57■□□□□ 0.56
DMDP11532 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DMDP11532 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
DMDP11532 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.57■□□□□ 0.56
DMDP11532 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
DMDP11532 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DMDP11532 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
DMDP11532 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DMDP11532 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
DMDP11532 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DMDP11532 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.57■□□□□ 0.56
DMDP11532 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.56■□□□□ 0.56
DMDP11532 KRT18P23-201ENST00000435622 1283 ntBASIC18.56■□□□□ 0.56
DMDP11532 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.56■□□□□ 0.56
DMDP11532 AC093909.1-201ENST00000504731 1122 ntBASIC18.56■□□□□ 0.56
DMDP11532 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.56■□□□□ 0.56
DMDP11532 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DMDP11532 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
DMDP11532 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DMDP11532 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DMDP11532 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.56■□□□□ 0.56
DMDP11532 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.56■□□□□ 0.56
DMDP11532 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DMDP11532 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
DMDP11532 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.56■□□□□ 0.56
DMDP11532 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
DMDP11532 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.56■□□□□ 0.56
DMDP11532 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
DMDP11532 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DMDP11532 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DMDP11532 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.56■□□□□ 0.56
DMDP11532 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.56■□□□□ 0.56
DMDP11532 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.56■□□□□ 0.56
DMDP11532 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.56■□□□□ 0.56
DMDP11532 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DMDP11532 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DMDP11532 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.56■□□□□ 0.56
DMDP11532 AC090616.6-201ENST00000582640 721 ntBASIC18.56■□□□□ 0.56
DMDP11532 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DMDP11532 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DMDP11532 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DMDP11532 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.55■□□□□ 0.56
DMDP11532 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DMDP11532 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.55■□□□□ 0.56
DMDP11532 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
DMDP11532 LINC00565-201ENST00000562710 2331 ntBASIC18.55■□□□□ 0.56
DMDP11532 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DMDP11532 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
DMDP11532 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.55■□□□□ 0.56
DMDP11532 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DMDP11532 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
DMDP11532 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.55■□□□□ 0.56
DMDP11532 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DMDP11532 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.55■□□□□ 0.56
DMDP11532 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DMDP11532 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
DMDP11532 AC008556.1-201ENST00000610908 2040 ntBASIC18.55■□□□□ 0.56
DMDP11532 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
DMDP11532 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.55■□□□□ 0.56
DMDP11532 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.55■□□□□ 0.56
DMDP11532 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.55■□□□□ 0.56
DMDP11532 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
DMDP11532 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
DMDP11532 MIR5100-201ENST00000579544 119 ntBASIC18.55■□□□□ 0.56
DMDP11532 FAM197Y3-203ENST00000618346 717 ntBASIC18.55■□□□□ 0.56
DMDP11532 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
DMDP11532 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DMDP11532 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.55■□□□□ 0.56
DMDP11532 AC073314.1-201ENST00000568729 2216 ntBASIC18.54■□□□□ 0.56
DMDP11532 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DMDP11532 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.54■□□□□ 0.56
DMDP11532 METTL21AP1-201ENST00000438852 635 ntBASIC18.54■□□□□ 0.56
DMDP11532 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.54■□□□□ 0.56
DMDP11532 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DMDP11532 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.54■□□□□ 0.56
DMDP11532 AC145285.3-201ENST00000564603 959 ntBASIC18.54■□□□□ 0.56
DMDP11532 ZNF259P1-201ENST00000407656 1365 ntBASIC18.54■□□□□ 0.56
DMDP11532 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DMDP11532 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
DMDP11532 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DMDP11532 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.54■□□□□ 0.56
DMDP11532 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.54■□□□□ 0.56
DMDP11532 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.54■□□□□ 0.56
DMDP11532 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DMDP11532 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.54■□□□□ 0.56
DMDP11532 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
DMDP11532 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.54■□□□□ 0.56
DMDP11532 AL137060.1-201ENST00000618151 2648 ntBASIC18.54■□□□□ 0.56
DMDP11532 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.54■□□□□ 0.56
DMDP11532 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.54■□□□□ 0.56
DMDP11532 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms