Protein–RNA interactions for Protein: P0DJJ0

SRGAP2C, SLIT-ROBO Rho GTPase-activating protein 2C, humanhuman

Predictions only

Length 459 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2CP0DJJ0 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SRGAP2CP0DJJ0 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SRGAP2CP0DJJ0 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SRGAP2CP0DJJ0 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SRGAP2CP0DJJ0 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.7■□□□□ 0.9
SRGAP2CP0DJJ0 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.7■□□□□ 0.9
SRGAP2CP0DJJ0 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.7■□□□□ 0.9
SRGAP2CP0DJJ0 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.7■□□□□ 0.9
SRGAP2CP0DJJ0 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.7■□□□□ 0.9
SRGAP2CP0DJJ0 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
SRGAP2CP0DJJ0 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SRGAP2CP0DJJ0 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.7■□□□□ 0.9
SRGAP2CP0DJJ0 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SRGAP2CP0DJJ0 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SRGAP2CP0DJJ0 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.7■□□□□ 0.9
SRGAP2CP0DJJ0 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.7■□□□□ 0.9
SRGAP2CP0DJJ0 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SRGAP2CP0DJJ0 AC008556.1-201ENST00000610908 2040 ntBASIC20.7■□□□□ 0.9
SRGAP2CP0DJJ0 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SRGAP2CP0DJJ0 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SRGAP2CP0DJJ0 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SRGAP2CP0DJJ0 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.69■□□□□ 0.9
SRGAP2CP0DJJ0 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SRGAP2CP0DJJ0 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRGAP2CP0DJJ0 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.69■□□□□ 0.9
SRGAP2CP0DJJ0 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SRGAP2CP0DJJ0 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRGAP2CP0DJJ0 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SRGAP2CP0DJJ0 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.69■□□□□ 0.9
SRGAP2CP0DJJ0 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.69■□□□□ 0.9
SRGAP2CP0DJJ0 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRGAP2CP0DJJ0 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRGAP2CP0DJJ0 HOMER2P1-201ENST00000455653 964 ntBASIC20.69■□□□□ 0.9
SRGAP2CP0DJJ0 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.69■□□□□ 0.9
SRGAP2CP0DJJ0 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SRGAP2CP0DJJ0 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRGAP2CP0DJJ0 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRGAP2CP0DJJ0 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.69■□□□□ 0.9
SRGAP2CP0DJJ0 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SRGAP2CP0DJJ0 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SRGAP2CP0DJJ0 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SRGAP2CP0DJJ0 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SRGAP2CP0DJJ0 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SRGAP2CP0DJJ0 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SRGAP2CP0DJJ0 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SRGAP2CP0DJJ0 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SRGAP2CP0DJJ0 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.68■□□□□ 0.9
SRGAP2CP0DJJ0 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SRGAP2CP0DJJ0 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.68■□□□□ 0.9
SRGAP2CP0DJJ0 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.68■□□□□ 0.9
SRGAP2CP0DJJ0 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SRGAP2CP0DJJ0 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SRGAP2CP0DJJ0 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SRGAP2CP0DJJ0 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SRGAP2CP0DJJ0 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SRGAP2CP0DJJ0 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SRGAP2CP0DJJ0 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.67■□□□□ 0.9
SRGAP2CP0DJJ0 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.67■□□□□ 0.9
SRGAP2CP0DJJ0 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRGAP2CP0DJJ0 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
SRGAP2CP0DJJ0 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.67■□□□□ 0.9
SRGAP2CP0DJJ0 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.67■□□□□ 0.9
SRGAP2CP0DJJ0 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.67■□□□□ 0.9
SRGAP2CP0DJJ0 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.67■□□□□ 0.9
SRGAP2CP0DJJ0 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.67■□□□□ 0.9
SRGAP2CP0DJJ0 KRT18P38-201ENST00000449496 1282 ntBASIC20.67■□□□□ 0.9
SRGAP2CP0DJJ0 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRGAP2CP0DJJ0 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.67■□□□□ 0.9
SRGAP2CP0DJJ0 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.67■□□□□ 0.9
SRGAP2CP0DJJ0 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.67■□□□□ 0.9
SRGAP2CP0DJJ0 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
SRGAP2CP0DJJ0 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SRGAP2CP0DJJ0 AC024243.1-201ENST00000609234 778 ntBASIC20.67■□□□□ 0.9
SRGAP2CP0DJJ0 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.67■□□□□ 0.9
SRGAP2CP0DJJ0 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SRGAP2CP0DJJ0 MYC-208ENST00000641036 567 ntBASIC20.67■□□□□ 0.9
SRGAP2CP0DJJ0 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SRGAP2CP0DJJ0 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRGAP2CP0DJJ0 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRGAP2CP0DJJ0 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRGAP2CP0DJJ0 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRGAP2CP0DJJ0 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRGAP2CP0DJJ0 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRGAP2CP0DJJ0 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.67■□□□□ 0.9
SRGAP2CP0DJJ0 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.67■□□□□ 0.9
SRGAP2CP0DJJ0 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.66■□□□□ 0.9
SRGAP2CP0DJJ0 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.66■□□□□ 0.9
SRGAP2CP0DJJ0 AL161938.1-201ENST00000569833 2180 ntBASIC20.66■□□□□ 0.9
SRGAP2CP0DJJ0 AL049812.1-201ENST00000432563 2267 ntBASIC20.66■□□□□ 0.9
SRGAP2CP0DJJ0 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.66■□□□□ 0.9
SRGAP2CP0DJJ0 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.66■□□□□ 0.9
SRGAP2CP0DJJ0 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SRGAP2CP0DJJ0 AL031133.1-201ENST00000406807 723 ntBASIC20.66■□□□□ 0.9
SRGAP2CP0DJJ0 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.66■□□□□ 0.9
SRGAP2CP0DJJ0 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.66■□□□□ 0.9
SRGAP2CP0DJJ0 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.66■□□□□ 0.9
SRGAP2CP0DJJ0 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.66■□□□□ 0.9
SRGAP2CP0DJJ0 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.66■□□□□ 0.9
SRGAP2CP0DJJ0 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SRGAP2CP0DJJ0 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms