Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TPM1P09493 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TPM1P09493 AL162430.1-201ENST00000480705 870 ntBASIC20.74■□□□□ 0.91
TPM1P09493 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.74■□□□□ 0.91
TPM1P09493 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.74■□□□□ 0.91
TPM1P09493 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TPM1P09493 RARRES2P6-201ENST00000567333 442 ntBASIC20.74■□□□□ 0.91
TPM1P09493 AC080038.1-201ENST00000611274 1154 ntBASIC20.74■□□□□ 0.91
TPM1P09493 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.74■□□□□ 0.91
TPM1P09493 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.74■□□□□ 0.91
TPM1P09493 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.74■□□□□ 0.91
TPM1P09493 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
TPM1P09493 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.73■□□□□ 0.91
TPM1P09493 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
TPM1P09493 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.73■□□□□ 0.91
TPM1P09493 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TPM1P09493 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TPM1P09493 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TPM1P09493 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TPM1P09493 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
TPM1P09493 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TPM1P09493 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TPM1P09493 AC026271.2-201ENST00000428091 497 ntBASIC20.73■□□□□ 0.91
TPM1P09493 TSPY21P-201ENST00000433481 731 ntBASIC20.73■□□□□ 0.91
TPM1P09493 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.73■□□□□ 0.91
TPM1P09493 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.73■□□□□ 0.91
TPM1P09493 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TPM1P09493 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TPM1P09493 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TPM1P09493 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.73■□□□□ 0.91
TPM1P09493 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.73■□□□□ 0.91
TPM1P09493 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TPM1P09493 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TPM1P09493 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TPM1P09493 AC092368.3-202ENST00000574180 1591 ntBASIC20.72■□□□□ 0.91
TPM1P09493 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TPM1P09493 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.72■□□□□ 0.91
TPM1P09493 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TPM1P09493 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TPM1P09493 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
TPM1P09493 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TPM1P09493 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TPM1P09493 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TPM1P09493 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TPM1P09493 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.72■□□□□ 0.91
TPM1P09493 MIPEPP3-201ENST00000412105 444 ntBASIC20.72■□□□□ 0.91
TPM1P09493 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.72■□□□□ 0.91
TPM1P09493 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.72■□□□□ 0.91
TPM1P09493 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.72■□□□□ 0.91
TPM1P09493 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.72■□□□□ 0.91
TPM1P09493 MIR5787-201ENST00000611784 55 ntBASIC20.72■□□□□ 0.91
TPM1P09493 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.72■□□□□ 0.91
TPM1P09493 AC073111.5-205ENST00000641717 521 ntBASIC20.72■□□□□ 0.91
TPM1P09493 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TPM1P09493 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
TPM1P09493 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.72■□□□□ 0.91
TPM1P09493 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TPM1P09493 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TPM1P09493 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TPM1P09493 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TPM1P09493 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TPM1P09493 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
TPM1P09493 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
TPM1P09493 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TPM1P09493 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TPM1P09493 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TPM1P09493 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
TPM1P09493 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TPM1P09493 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TPM1P09493 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TPM1P09493 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.71■□□□□ 0.91
TPM1P09493 MIR663A-201ENST00000385250 93 ntBASIC20.71■□□□□ 0.91
TPM1P09493 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.71■□□□□ 0.91
TPM1P09493 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
TPM1P09493 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.71■□□□□ 0.91
TPM1P09493 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.71■□□□□ 0.91
TPM1P09493 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.71■□□□□ 0.91
TPM1P09493 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.71■□□□□ 0.91
TPM1P09493 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TPM1P09493 AC022517.1-201ENST00000592429 346 ntBASIC20.71■□□□□ 0.91
TPM1P09493 AL050303.2-201ENST00000619798 666 ntBASIC20.71■□□□□ 0.91
TPM1P09493 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TPM1P09493 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
TPM1P09493 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
TPM1P09493 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.71■□□□□ 0.91
TPM1P09493 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TPM1P09493 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.71■□□□□ 0.91
TPM1P09493 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TPM1P09493 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
TPM1P09493 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TPM1P09493 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
TPM1P09493 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.7■□□□□ 0.91
TPM1P09493 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
TPM1P09493 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TPM1P09493 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TPM1P09493 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TPM1P09493 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TPM1P09493 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TPM1P09493 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TPM1P09493 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms