Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC15.64■□□□□ 0.1
CTSDP07339 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTSDP07339 HR-201ENST00000312841 5351 ntTSL 5 BASIC15.64■□□□□ 0.09
CTSDP07339 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CTSDP07339 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CTSDP07339 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC15.64■□□□□ 0.09
CTSDP07339 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC15.64■□□□□ 0.09
CTSDP07339 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC15.64■□□□□ 0.09
CTSDP07339 FZD10-202ENST00000539839 3282 ntBASIC15.64■□□□□ 0.09
CTSDP07339 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.64■□□□□ 0.09
CTSDP07339 GOLGA6L5P-202ENST00000515341 1828 ntBASIC15.64■□□□□ 0.09
CTSDP07339 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
CTSDP07339 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTSDP07339 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
CTSDP07339 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTSDP07339 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CTSDP07339 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC15.64■□□□□ 0.09
CTSDP07339 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTSDP07339 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTSDP07339 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTSDP07339 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTSDP07339 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CTSDP07339 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTSDP07339 AC004911.1-201ENST00000416316 871 ntBASIC15.64■□□□□ 0.09
CTSDP07339 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC15.64■□□□□ 0.09
CTSDP07339 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC15.64■□□□□ 0.09
CTSDP07339 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
CTSDP07339 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CTSDP07339 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC15.64■□□□□ 0.09
CTSDP07339 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTSDP07339 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTSDP07339 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTSDP07339 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTSDP07339 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTSDP07339 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTSDP07339 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC15.64■□□□□ 0.09
CTSDP07339 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CTSDP07339 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTSDP07339 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTSDP07339 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CTSDP07339 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CTSDP07339 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CTSDP07339 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.64■□□□□ 0.09
CTSDP07339 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTSDP07339 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTSDP07339 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTSDP07339 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTSDP07339 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC15.63■□□□□ 0.09
CTSDP07339 HEIH-201ENST00000623091 1652 ntBASIC15.63■□□□□ 0.09
CTSDP07339 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
CTSDP07339 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CTSDP07339 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
CTSDP07339 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CTSDP07339 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CTSDP07339 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
CTSDP07339 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CTSDP07339 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CTSDP07339 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CTSDP07339 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CTSDP07339 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CTSDP07339 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC15.63■□□□□ 0.09
CTSDP07339 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC15.63■□□□□ 0.09
CTSDP07339 SLC25A6P5-201ENST00000435663 894 ntBASIC15.63■□□□□ 0.09
CTSDP07339 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC15.63■□□□□ 0.09
CTSDP07339 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC15.63■□□□□ 0.09
CTSDP07339 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC15.63■□□□□ 0.09
CTSDP07339 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC15.63■□□□□ 0.09
CTSDP07339 AC092437.1-201ENST00000624794 1048 ntBASIC15.63■□□□□ 0.09
CTSDP07339 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC15.63■□□□□ 0.09
CTSDP07339 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CTSDP07339 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CTSDP07339 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CTSDP07339 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CTSDP07339 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC15.63■□□□□ 0.09
CTSDP07339 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CTSDP07339 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CTSDP07339 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
CTSDP07339 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CTSDP07339 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CTSDP07339 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CTSDP07339 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
CTSDP07339 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC15.62■□□□□ 0.09
CTSDP07339 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CTSDP07339 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CTSDP07339 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.62■□□□□ 0.09
CTSDP07339 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CTSDP07339 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CTSDP07339 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CTSDP07339 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CTSDP07339 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC15.62■□□□□ 0.09
CTSDP07339 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CTSDP07339 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
CTSDP07339 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC15.62■□□□□ 0.09
CTSDP07339 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CTSDP07339 NME6-213ENST00000451657 871 ntTSL 2 BASIC15.62■□□□□ 0.09
CTSDP07339 AC133552.2-202ENST00000575694 574 ntBASIC15.62■□□□□ 0.09
CTSDP07339 AC092666.2-201ENST00000613287 246 ntBASIC15.62■□□□□ 0.09
CTSDP07339 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CTSDP07339 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CTSDP07339 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms