Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
APOBP04114 AC025062.2-201ENST00000605477 670 ntBASIC11.74□□□□□ -0.53
APOBP04114 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
APOBP04114 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC11.74□□□□□ -0.53
APOBP04114 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
APOBP04114 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
APOBP04114 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC11.74□□□□□ -0.53
APOBP04114 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC11.74□□□□□ -0.53
APOBP04114 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
APOBP04114 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
APOBP04114 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
APOBP04114 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC11.74□□□□□ -0.53
APOBP04114 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC11.74□□□□□ -0.53
APOBP04114 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
APOBP04114 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
APOBP04114 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
APOBP04114 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC11.73□□□□□ -0.53
APOBP04114 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC11.73□□□□□ -0.53
APOBP04114 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
APOBP04114 AC012676.1-201ENST00000574705 1949 ntBASIC11.73□□□□□ -0.53
APOBP04114 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
APOBP04114 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC11.73□□□□□ -0.53
APOBP04114 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC11.73□□□□□ -0.53
APOBP04114 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
APOBP04114 AC012640.2-201ENST00000561606 901 ntBASIC11.73□□□□□ -0.53
APOBP04114 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC11.73□□□□□ -0.53
APOBP04114 AL355877.3-201ENST00000622820 899 ntBASIC11.73□□□□□ -0.53
APOBP04114 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
APOBP04114 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC11.73□□□□□ -0.53
APOBP04114 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC11.73□□□□□ -0.53
APOBP04114 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC11.73□□□□□ -0.53
APOBP04114 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
APOBP04114 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
APOBP04114 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
APOBP04114 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
APOBP04114 KRT18P3-201ENST00000451602 1288 ntBASIC11.73□□□□□ -0.53
APOBP04114 AC132008.2-207ENST00000454517 770 ntBASIC11.73□□□□□ -0.53
APOBP04114 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC11.73□□□□□ -0.53
APOBP04114 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC11.73□□□□□ -0.53
APOBP04114 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC11.73□□□□□ -0.53
APOBP04114 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC11.73□□□□□ -0.53
APOBP04114 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
APOBP04114 AP001269.4-201ENST00000609611 512 ntBASIC11.73□□□□□ -0.53
APOBP04114 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
APOBP04114 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
APOBP04114 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
APOBP04114 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC11.73□□□□□ -0.53
APOBP04114 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
APOBP04114 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC11.73□□□□□ -0.53
APOBP04114 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC11.72□□□□□ -0.53
APOBP04114 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC11.72□□□□□ -0.53
APOBP04114 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
APOBP04114 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
APOBP04114 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
APOBP04114 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
APOBP04114 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
APOBP04114 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
APOBP04114 CCDC74BP1-201ENST00000508880 1123 ntBASIC11.72□□□□□ -0.53
APOBP04114 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC11.72□□□□□ -0.53
APOBP04114 MIR3180-4-201ENST00000582223 153 ntBASIC11.72□□□□□ -0.53
APOBP04114 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC11.72□□□□□ -0.53
APOBP04114 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
APOBP04114 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
APOBP04114 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC11.72□□□□□ -0.53
APOBP04114 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
APOBP04114 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
APOBP04114 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
APOBP04114 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
APOBP04114 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
APOBP04114 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
APOBP04114 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
APOBP04114 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC11.72□□□□□ -0.53
APOBP04114 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC11.72□□□□□ -0.53
APOBP04114 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC11.72□□□□□ -0.53
APOBP04114 AC124864.1-201ENST00000623408 392 ntBASIC11.72□□□□□ -0.53
APOBP04114 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
APOBP04114 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC11.72□□□□□ -0.53
APOBP04114 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
APOBP04114 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
APOBP04114 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
APOBP04114 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
APOBP04114 ZNF815P-204ENST00000434898 1737 ntBASIC11.72□□□□□ -0.53
APOBP04114 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC11.72□□□□□ -0.53
APOBP04114 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC11.72□□□□□ -0.53
APOBP04114 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC11.72□□□□□ -0.53
APOBP04114 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
APOBP04114 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC11.72□□□□□ -0.53
APOBP04114 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC11.72□□□□□ -0.53
APOBP04114 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
APOBP04114 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
APOBP04114 CALY-203ENST00000368558 825 ntTSL 5 BASIC11.71□□□□□ -0.53
APOBP04114 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
APOBP04114 RFPL4AP1-201ENST00000530883 850 ntBASIC11.71□□□□□ -0.53
APOBP04114 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC11.71□□□□□ -0.53
APOBP04114 MIR3197-201ENST00000582241 73 ntBASIC11.71□□□□□ -0.53
APOBP04114 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
APOBP04114 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC11.71□□□□□ -0.53
APOBP04114 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
APOBP04114 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC11.71□□□□□ -0.53
APOBP04114 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms