Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.73■□□□□ 0.75
TRUB2O95900 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRUB2O95900 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
TRUB2O95900 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
TRUB2O95900 CCR12P-201ENST00000446203 998 ntBASIC19.73■□□□□ 0.75
TRUB2O95900 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.73■□□□□ 0.75
TRUB2O95900 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.73■□□□□ 0.75
TRUB2O95900 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRUB2O95900 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRUB2O95900 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.73■□□□□ 0.75
TRUB2O95900 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.73■□□□□ 0.75
TRUB2O95900 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.73■□□□□ 0.75
TRUB2O95900 AC145285.6-201ENST00000604632 637 ntBASIC19.73■□□□□ 0.75
TRUB2O95900 AC012306.2-201ENST00000609350 630 ntBASIC19.73■□□□□ 0.75
TRUB2O95900 AC116562.4-202ENST00000641738 218 ntBASIC19.73■□□□□ 0.75
TRUB2O95900 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
TRUB2O95900 KRT8P3-201ENST00000519669 1449 ntBASIC19.73■□□□□ 0.75
TRUB2O95900 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.73■□□□□ 0.75
TRUB2O95900 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRUB2O95900 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.73■□□□□ 0.75
TRUB2O95900 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
TRUB2O95900 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRUB2O95900 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRUB2O95900 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRUB2O95900 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRUB2O95900 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TRUB2O95900 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRUB2O95900 INGX-201ENST00000359239 846 ntBASIC19.72■□□□□ 0.75
TRUB2O95900 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRUB2O95900 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRUB2O95900 TSPY17P-201ENST00000450329 467 ntBASIC19.72■□□□□ 0.75
TRUB2O95900 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.72■□□□□ 0.75
TRUB2O95900 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.72■□□□□ 0.75
TRUB2O95900 AL353719.1-201ENST00000566847 864 ntBASIC19.72■□□□□ 0.75
TRUB2O95900 AC092338.2-201ENST00000568827 1415 ntBASIC19.72■□□□□ 0.75
TRUB2O95900 AC097493.4-201ENST00000641197 219 ntBASIC19.72■□□□□ 0.75
TRUB2O95900 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRUB2O95900 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.72■□□□□ 0.75
TRUB2O95900 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRUB2O95900 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRUB2O95900 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRUB2O95900 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.72■□□□□ 0.75
TRUB2O95900 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRUB2O95900 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
TRUB2O95900 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRUB2O95900 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRUB2O95900 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRUB2O95900 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.71■□□□□ 0.75
TRUB2O95900 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.71■□□□□ 0.75
TRUB2O95900 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRUB2O95900 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
TRUB2O95900 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.71■□□□□ 0.75
TRUB2O95900 AC007663.1-201ENST00000438948 1240 ntBASIC19.71■□□□□ 0.75
TRUB2O95900 AC128688.1-201ENST00000487626 519 ntBASIC19.71■□□□□ 0.75
TRUB2O95900 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRUB2O95900 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.71■□□□□ 0.75
TRUB2O95900 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRUB2O95900 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRUB2O95900 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRUB2O95900 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRUB2O95900 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRUB2O95900 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRUB2O95900 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
TRUB2O95900 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRUB2O95900 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRUB2O95900 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRUB2O95900 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRUB2O95900 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRUB2O95900 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRUB2O95900 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRUB2O95900 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRUB2O95900 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.7■□□□□ 0.74
TRUB2O95900 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
TRUB2O95900 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRUB2O95900 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRUB2O95900 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.7■□□□□ 0.74
TRUB2O95900 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TRUB2O95900 ECEL1P3-201ENST00000427961 737 ntBASIC19.7■□□□□ 0.74
TRUB2O95900 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.7■□□□□ 0.74
TRUB2O95900 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.7■□□□□ 0.74
TRUB2O95900 LINC01023-201ENST00000606054 436 ntBASIC19.7■□□□□ 0.74
TRUB2O95900 AC008622.2-201ENST00000617006 1229 ntBASIC19.7■□□□□ 0.74
TRUB2O95900 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
TRUB2O95900 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.7■□□□□ 0.74
TRUB2O95900 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRUB2O95900 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRUB2O95900 KRT18P22-201ENST00000402024 1347 ntBASIC19.7■□□□□ 0.74
TRUB2O95900 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.7■□□□□ 0.74
TRUB2O95900 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRUB2O95900 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRUB2O95900 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRUB2O95900 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.7■□□□□ 0.74
TRUB2O95900 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.7■□□□□ 0.74
TRUB2O95900 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TRUB2O95900 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRUB2O95900 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRUB2O95900 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
TRUB2O95900 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.69■□□□□ 0.74
TRUB2O95900 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRUB2O95900 ECEL1P2-202ENST00000465689 757 ntBASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms