Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN1O95832 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN1O95832 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.79■□□□□ 0.28
CLDN1O95832 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN1O95832 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.79■□□□□ 0.28
CLDN1O95832 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.79■□□□□ 0.28
CLDN1O95832 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.79■□□□□ 0.28
CLDN1O95832 LINC01465-201ENST00000408887 1940 ntBASIC16.79■□□□□ 0.28
CLDN1O95832 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN1O95832 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
CLDN1O95832 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN1O95832 MRPL3P1-201ENST00000400109 1033 ntBASIC16.79■□□□□ 0.28
CLDN1O95832 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN1O95832 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN1O95832 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN1O95832 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN1O95832 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN1O95832 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.79■□□□□ 0.28
CLDN1O95832 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.79■□□□□ 0.28
CLDN1O95832 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.79■□□□□ 0.28
CLDN1O95832 AC117500.6-201ENST00000624871 588 ntBASIC16.79■□□□□ 0.28
CLDN1O95832 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.79■□□□□ 0.28
CLDN1O95832 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN1O95832 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.79■□□□□ 0.28
CLDN1O95832 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN1O95832 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN1O95832 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN1O95832 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN1O95832 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.79■□□□□ 0.28
CLDN1O95832 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN1O95832 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN1O95832 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.79■□□□□ 0.28
CLDN1O95832 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN1O95832 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CLDN1O95832 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN1O95832 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN1O95832 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC16.78■□□□□ 0.28
CLDN1O95832 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN1O95832 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN1O95832 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN1O95832 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN1O95832 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN1O95832 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.78■□□□□ 0.28
CLDN1O95832 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN1O95832 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.78■□□□□ 0.28
CLDN1O95832 AL662844.1-201ENST00000546340 181 ntBASIC16.78■□□□□ 0.28
CLDN1O95832 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.78■□□□□ 0.28
CLDN1O95832 AL121772.3-201ENST00000610840 674 ntBASIC16.78■□□□□ 0.28
CLDN1O95832 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.78■□□□□ 0.28
CLDN1O95832 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN1O95832 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN1O95832 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN1O95832 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN1O95832 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CLDN1O95832 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN1O95832 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
CLDN1O95832 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN1O95832 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC16.78■□□□□ 0.28
CLDN1O95832 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN1O95832 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CLDN1O95832 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN1O95832 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN1O95832 AL512408.1-201ENST00000569378 2000 ntBASIC16.77■□□□□ 0.28
CLDN1O95832 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.77■□□□□ 0.28
CLDN1O95832 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN1O95832 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN1O95832 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN1O95832 KRT8P41-201ENST00000533985 1514 ntBASIC16.77■□□□□ 0.28
CLDN1O95832 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN1O95832 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN1O95832 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN1O95832 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN1O95832 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN1O95832 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN1O95832 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN1O95832 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CLDN1O95832 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN1O95832 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.77■□□□□ 0.28
CLDN1O95832 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.77■□□□□ 0.28
CLDN1O95832 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN1O95832 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.77■□□□□ 0.28
CLDN1O95832 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.77■□□□□ 0.28
CLDN1O95832 FOSL1P1-201ENST00000511041 816 ntBASIC16.77■□□□□ 0.28
CLDN1O95832 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN1O95832 KRT8P26-201ENST00000534154 1276 ntBASIC16.77■□□□□ 0.28
CLDN1O95832 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CLDN1O95832 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN1O95832 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.77■□□□□ 0.28
CLDN1O95832 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLDN1O95832 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
CLDN1O95832 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.77■□□□□ 0.27
CLDN1O95832 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.77■□□□□ 0.27
CLDN1O95832 AFG3L1P-217ENST00000557444 2447 ntBASIC16.77■□□□□ 0.27
CLDN1O95832 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CLDN1O95832 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLDN1O95832 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CLDN1O95832 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CLDN1O95832 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN1O95832 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC16.76■□□□□ 0.27
CLDN1O95832 ME2-218ENST00000640965 2476 ntTSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms