Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
LTN1O94822 AKR1C7P-201ENST00000305623 895 ntBASIC24.96■■□□□ 1.59
LTN1O94822 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
LTN1O94822 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC24.96■■□□□ 1.59
LTN1O94822 AC099336.1-202ENST00000602961 463 ntBASIC24.96■■□□□ 1.59
LTN1O94822 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
LTN1O94822 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
LTN1O94822 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
LTN1O94822 KRT8P32-201ENST00000512863 1461 ntBASIC24.96■■□□□ 1.59
LTN1O94822 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
LTN1O94822 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
LTN1O94822 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
LTN1O94822 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
LTN1O94822 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC24.96■■□□□ 1.59
LTN1O94822 HEIH-201ENST00000623091 1652 ntBASIC24.95■■□□□ 1.59
LTN1O94822 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
LTN1O94822 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
LTN1O94822 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
LTN1O94822 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC24.95■■□□□ 1.59
LTN1O94822 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.59
LTN1O94822 AC091607.1-201ENST00000490318 1060 ntBASIC24.95■■□□□ 1.59
LTN1O94822 KRT18P31-201ENST00000506277 1292 ntBASIC24.95■■□□□ 1.59
LTN1O94822 CDV3-207ENST00000508481 661 ntTSL 3 BASIC24.95■■□□□ 1.59
LTN1O94822 AC068587.9-201ENST00000641814 219 ntBASIC24.95■■□□□ 1.59
LTN1O94822 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC24.95■■□□□ 1.59
LTN1O94822 Z98044.1-201ENST00000632503 1764 ntBASIC24.95■■□□□ 1.59
LTN1O94822 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
LTN1O94822 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC24.95■■□□□ 1.58
LTN1O94822 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC24.95■■□□□ 1.58
LTN1O94822 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
LTN1O94822 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC24.95■■□□□ 1.58
LTN1O94822 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
LTN1O94822 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC24.95■■□□□ 1.58
LTN1O94822 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC24.95■■□□□ 1.58
LTN1O94822 AP003733.1-201ENST00000491725 852 ntBASIC24.95■■□□□ 1.58
LTN1O94822 FOSL1P1-201ENST00000511041 816 ntBASIC24.95■■□□□ 1.58
LTN1O94822 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC24.95■■□□□ 1.58
LTN1O94822 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
LTN1O94822 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
LTN1O94822 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
LTN1O94822 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
LTN1O94822 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
LTN1O94822 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC24.95■■□□□ 1.58
LTN1O94822 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
LTN1O94822 AC141586.3-201ENST00000562166 1838 ntBASIC24.94■■□□□ 1.58
LTN1O94822 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
LTN1O94822 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC24.94■■□□□ 1.58
LTN1O94822 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
LTN1O94822 NUS1P1-201ENST00000446295 882 ntBASIC24.94■■□□□ 1.58
LTN1O94822 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC24.94■■□□□ 1.58
LTN1O94822 AP005901.3-202ENST00000581653 237 ntBASIC24.94■■□□□ 1.58
LTN1O94822 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
LTN1O94822 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
LTN1O94822 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
LTN1O94822 CLDN5-201ENST00000403084 2357 ntBASIC24.94■■□□□ 1.58
LTN1O94822 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
LTN1O94822 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
LTN1O94822 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC24.94■■□□□ 1.58
LTN1O94822 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
LTN1O94822 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
LTN1O94822 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
LTN1O94822 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
LTN1O94822 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
LTN1O94822 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC24.93■■□□□ 1.58
LTN1O94822 TBCB-205ENST00000585746 875 ntTSL 3 BASIC24.93■■□□□ 1.58
LTN1O94822 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
LTN1O94822 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
LTN1O94822 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
LTN1O94822 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC24.93■■□□□ 1.58
LTN1O94822 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC24.93■■□□□ 1.58
LTN1O94822 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC24.93■■□□□ 1.58
LTN1O94822 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC24.93■■□□□ 1.58
LTN1O94822 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC24.93■■□□□ 1.58
LTN1O94822 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC24.93■■□□□ 1.58
LTN1O94822 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
LTN1O94822 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
LTN1O94822 IGHGP-201ENST00000390555 1178 ntBASIC24.93■■□□□ 1.58
LTN1O94822 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC24.93■■□□□ 1.58
LTN1O94822 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC24.93■■□□□ 1.58
LTN1O94822 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC24.93■■□□□ 1.58
LTN1O94822 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC24.93■■□□□ 1.58
LTN1O94822 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
LTN1O94822 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC24.93■■□□□ 1.58
LTN1O94822 TP73-AS1-207ENST00000624167 988 ntBASIC24.93■■□□□ 1.58
LTN1O94822 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
LTN1O94822 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
LTN1O94822 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC24.92■■□□□ 1.58
LTN1O94822 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC24.92■■□□□ 1.58
LTN1O94822 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
LTN1O94822 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC24.92■■□□□ 1.58
LTN1O94822 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
LTN1O94822 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC24.92■■□□□ 1.58
LTN1O94822 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
LTN1O94822 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC24.92■■□□□ 1.58
LTN1O94822 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
LTN1O94822 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
LTN1O94822 KRT8P50-201ENST00000562022 1438 ntBASIC24.92■■□□□ 1.58
LTN1O94822 KRT89P-201ENST00000620027 1478 ntBASIC24.92■■□□□ 1.58
LTN1O94822 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
LTN1O94822 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms