Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.76■□□□□ 0.75
BEST1O76090 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BEST1O76090 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BEST1O76090 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
BEST1O76090 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BEST1O76090 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
BEST1O76090 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.76■□□□□ 0.75
BEST1O76090 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.76■□□□□ 0.75
BEST1O76090 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.76■□□□□ 0.75
BEST1O76090 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.76■□□□□ 0.75
BEST1O76090 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.76■□□□□ 0.75
BEST1O76090 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BEST1O76090 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.76■□□□□ 0.75
BEST1O76090 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BEST1O76090 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
BEST1O76090 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BEST1O76090 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BEST1O76090 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BEST1O76090 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.76■□□□□ 0.75
BEST1O76090 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BEST1O76090 MTMR9LP-203ENST00000426597 1545 ntBASIC19.76■□□□□ 0.75
BEST1O76090 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
BEST1O76090 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BEST1O76090 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BEST1O76090 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.75■□□□□ 0.75
BEST1O76090 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
BEST1O76090 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
BEST1O76090 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.75■□□□□ 0.75
BEST1O76090 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
BEST1O76090 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BEST1O76090 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.75■□□□□ 0.75
BEST1O76090 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BEST1O76090 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.75■□□□□ 0.75
BEST1O76090 TSPY5P-201ENST00000426936 936 ntBASIC19.75■□□□□ 0.75
BEST1O76090 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BEST1O76090 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BEST1O76090 AC063952.2-201ENST00000498792 1227 ntBASIC19.75■□□□□ 0.75
BEST1O76090 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.75■□□□□ 0.75
BEST1O76090 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BEST1O76090 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.75■□□□□ 0.75
BEST1O76090 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.75■□□□□ 0.75
BEST1O76090 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.75■□□□□ 0.75
BEST1O76090 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BEST1O76090 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.75■□□□□ 0.75
BEST1O76090 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
BEST1O76090 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BEST1O76090 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BEST1O76090 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
BEST1O76090 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
BEST1O76090 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BEST1O76090 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BEST1O76090 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
BEST1O76090 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
BEST1O76090 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.74■□□□□ 0.75
BEST1O76090 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BEST1O76090 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.74■□□□□ 0.75
BEST1O76090 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BEST1O76090 RNF152P1-201ENST00000397754 604 ntBASIC19.74■□□□□ 0.75
BEST1O76090 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
BEST1O76090 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.74■□□□□ 0.75
BEST1O76090 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.74■□□□□ 0.75
BEST1O76090 GCSHP2-201ENST00000560971 527 ntBASIC19.74■□□□□ 0.75
BEST1O76090 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
BEST1O76090 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.74■□□□□ 0.75
BEST1O76090 NEK4P2-201ENST00000580004 1012 ntBASIC19.74■□□□□ 0.75
BEST1O76090 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
BEST1O76090 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BEST1O76090 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
BEST1O76090 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BEST1O76090 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BEST1O76090 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
BEST1O76090 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.74■□□□□ 0.75
BEST1O76090 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
BEST1O76090 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BEST1O76090 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.74■□□□□ 0.75
BEST1O76090 AL357033.4-201ENST00000617703 1807 ntBASIC19.74■□□□□ 0.75
BEST1O76090 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
BEST1O76090 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BEST1O76090 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
BEST1O76090 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.73■□□□□ 0.75
BEST1O76090 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BEST1O76090 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
BEST1O76090 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.73■□□□□ 0.75
BEST1O76090 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BEST1O76090 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.73■□□□□ 0.75
BEST1O76090 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.73■□□□□ 0.75
BEST1O76090 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
BEST1O76090 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BEST1O76090 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
BEST1O76090 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BEST1O76090 MIR564-202ENST00000385049 94 ntBASIC19.73■□□□□ 0.75
BEST1O76090 KRT18P35-201ENST00000510488 1269 ntBASIC19.73■□□□□ 0.75
BEST1O76090 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
BEST1O76090 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.73■□□□□ 0.75
BEST1O76090 AC140113.3-201ENST00000605663 199 ntBASIC19.73■□□□□ 0.75
BEST1O76090 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.73■□□□□ 0.75
BEST1O76090 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
BEST1O76090 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BEST1O76090 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BEST1O76090 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms