Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.88■□□□□ 0.29
PFDN1O60925 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PFDN1O60925 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PFDN1O60925 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PFDN1O60925 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.88■□□□□ 0.29
PFDN1O60925 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PFDN1O60925 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PFDN1O60925 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.88■□□□□ 0.29
PFDN1O60925 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PFDN1O60925 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PFDN1O60925 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
PFDN1O60925 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PFDN1O60925 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PFDN1O60925 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PFDN1O60925 AC009237.14-201ENST00000609975 1594 ntBASIC16.88■□□□□ 0.29
PFDN1O60925 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
PFDN1O60925 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PFDN1O60925 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.88■□□□□ 0.29
PFDN1O60925 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PFDN1O60925 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PFDN1O60925 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.88■□□□□ 0.29
PFDN1O60925 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PFDN1O60925 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.88■□□□□ 0.29
PFDN1O60925 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.88■□□□□ 0.29
PFDN1O60925 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PFDN1O60925 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PFDN1O60925 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PFDN1O60925 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PFDN1O60925 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PFDN1O60925 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
PFDN1O60925 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
PFDN1O60925 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PFDN1O60925 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PFDN1O60925 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PFDN1O60925 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PFDN1O60925 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PFDN1O60925 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PFDN1O60925 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PFDN1O60925 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PFDN1O60925 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.87■□□□□ 0.29
PFDN1O60925 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PFDN1O60925 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PFDN1O60925 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PFDN1O60925 HES4-202ENST00000428771 1040 ntTSL 2 BASIC16.87■□□□□ 0.29
PFDN1O60925 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PFDN1O60925 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
PFDN1O60925 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.87■□□□□ 0.29
PFDN1O60925 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.87■□□□□ 0.29
PFDN1O60925 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PFDN1O60925 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PFDN1O60925 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PFDN1O60925 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PFDN1O60925 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.87■□□□□ 0.29
PFDN1O60925 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PFDN1O60925 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PFDN1O60925 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.86■□□□□ 0.29
PFDN1O60925 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PFDN1O60925 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PFDN1O60925 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PFDN1O60925 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC16.86■□□□□ 0.29
PFDN1O60925 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PFDN1O60925 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PFDN1O60925 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PFDN1O60925 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PFDN1O60925 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PFDN1O60925 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PFDN1O60925 AC120024.1-201ENST00000562672 995 ntBASIC16.86■□□□□ 0.29
PFDN1O60925 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC16.86■□□□□ 0.29
PFDN1O60925 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PFDN1O60925 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PFDN1O60925 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PFDN1O60925 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PFDN1O60925 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.86■□□□□ 0.29
PFDN1O60925 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.86■□□□□ 0.29
PFDN1O60925 PCDHB17P-201ENST00000539533 2393 ntBASIC16.86■□□□□ 0.29
PFDN1O60925 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PFDN1O60925 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
PFDN1O60925 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PFDN1O60925 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PFDN1O60925 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PFDN1O60925 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PFDN1O60925 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PFDN1O60925 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PFDN1O60925 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PFDN1O60925 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PFDN1O60925 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
PFDN1O60925 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
PFDN1O60925 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.85■□□□□ 0.29
PFDN1O60925 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PFDN1O60925 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PFDN1O60925 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.85■□□□□ 0.29
PFDN1O60925 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.85■□□□□ 0.29
PFDN1O60925 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PFDN1O60925 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PFDN1O60925 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PFDN1O60925 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
PFDN1O60925 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PFDN1O60925 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PFDN1O60925 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PFDN1O60925 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms