Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18■□□□□ 0.47
LCMT2O60294 NFYC-AS1-201ENST00000606277 1687 ntBASIC18■□□□□ 0.47
LCMT2O60294 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
LCMT2O60294 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
LCMT2O60294 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18■□□□□ 0.47
LCMT2O60294 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
LCMT2O60294 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
LCMT2O60294 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18■□□□□ 0.47
LCMT2O60294 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
LCMT2O60294 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18■□□□□ 0.47
LCMT2O60294 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18■□□□□ 0.47
LCMT2O60294 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18■□□□□ 0.47
LCMT2O60294 AC012306.2-201ENST00000609350 630 ntBASIC18■□□□□ 0.47
LCMT2O60294 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18■□□□□ 0.47
LCMT2O60294 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LCMT2O60294 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
LCMT2O60294 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18■□□□□ 0.47
LCMT2O60294 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18■□□□□ 0.47
LCMT2O60294 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18■□□□□ 0.47
LCMT2O60294 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18■□□□□ 0.47
LCMT2O60294 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
LCMT2O60294 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
LCMT2O60294 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LCMT2O60294 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LCMT2O60294 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.99■□□□□ 0.47
LCMT2O60294 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.99■□□□□ 0.47
LCMT2O60294 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.99■□□□□ 0.47
LCMT2O60294 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LCMT2O60294 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.99■□□□□ 0.47
LCMT2O60294 AC128688.1-201ENST00000487626 519 ntBASIC17.99■□□□□ 0.47
LCMT2O60294 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.99■□□□□ 0.47
LCMT2O60294 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
LCMT2O60294 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.99■□□□□ 0.47
LCMT2O60294 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.99■□□□□ 0.47
LCMT2O60294 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LCMT2O60294 AC145285.6-201ENST00000604632 637 ntBASIC17.99■□□□□ 0.47
LCMT2O60294 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
LCMT2O60294 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
LCMT2O60294 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LCMT2O60294 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LCMT2O60294 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
LCMT2O60294 AC008556.1-201ENST00000610908 2040 ntBASIC17.99■□□□□ 0.47
LCMT2O60294 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.99■□□□□ 0.47
LCMT2O60294 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LCMT2O60294 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.99■□□□□ 0.47
LCMT2O60294 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.98■□□□□ 0.47
LCMT2O60294 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
LCMT2O60294 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LCMT2O60294 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.98■□□□□ 0.47
LCMT2O60294 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LCMT2O60294 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LCMT2O60294 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LCMT2O60294 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LCMT2O60294 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.98■□□□□ 0.47
LCMT2O60294 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LCMT2O60294 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LCMT2O60294 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
LCMT2O60294 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.98■□□□□ 0.47
LCMT2O60294 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.98■□□□□ 0.47
LCMT2O60294 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
LCMT2O60294 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LCMT2O60294 FAM87A-204ENST00000613235 858 ntBASIC17.98■□□□□ 0.47
LCMT2O60294 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.98■□□□□ 0.47
LCMT2O60294 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LCMT2O60294 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
LCMT2O60294 AC010653.2-201ENST00000623505 997 ntBASIC17.98■□□□□ 0.47
LCMT2O60294 AC097493.4-201ENST00000641197 219 ntBASIC17.98■□□□□ 0.47
LCMT2O60294 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.98■□□□□ 0.47
LCMT2O60294 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
LCMT2O60294 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.98■□□□□ 0.47
LCMT2O60294 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LCMT2O60294 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LCMT2O60294 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LCMT2O60294 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.98■□□□□ 0.47
LCMT2O60294 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.98■□□□□ 0.47
LCMT2O60294 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LCMT2O60294 MTMR9LP-203ENST00000426597 1545 ntBASIC17.98■□□□□ 0.47
LCMT2O60294 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.98■□□□□ 0.47
LCMT2O60294 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LCMT2O60294 KRT18P22-201ENST00000402024 1347 ntBASIC17.98■□□□□ 0.47
LCMT2O60294 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
LCMT2O60294 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
LCMT2O60294 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.97■□□□□ 0.47
LCMT2O60294 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LCMT2O60294 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
LCMT2O60294 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LCMT2O60294 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
LCMT2O60294 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.97■□□□□ 0.47
LCMT2O60294 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
LCMT2O60294 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LCMT2O60294 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LCMT2O60294 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.97■□□□□ 0.47
LCMT2O60294 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
LCMT2O60294 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LCMT2O60294 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
LCMT2O60294 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.96■□□□□ 0.47
LCMT2O60294 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LCMT2O60294 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LCMT2O60294 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LCMT2O60294 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms