Protein–RNA interactions for Protein: O43889

CREB3, Cyclic AMP-responsive element-binding protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3O43889 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.64■□□□□ 0.73
CREB3O43889 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CREB3O43889 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CREB3O43889 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CREB3O43889 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.64■□□□□ 0.73
CREB3O43889 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CREB3O43889 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CREB3O43889 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.64■□□□□ 0.73
CREB3O43889 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CREB3O43889 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.64■□□□□ 0.73
CREB3O43889 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CREB3O43889 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.64■□□□□ 0.73
CREB3O43889 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CREB3O43889 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CREB3O43889 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CREB3O43889 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CREB3O43889 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CREB3O43889 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CREB3O43889 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CREB3O43889 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CREB3O43889 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.63■□□□□ 0.73
CREB3O43889 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CREB3O43889 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.63■□□□□ 0.73
CREB3O43889 AC006333.2-201ENST00000607957 2099 ntBASIC19.63■□□□□ 0.73
CREB3O43889 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CREB3O43889 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CREB3O43889 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CREB3O43889 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.63■□□□□ 0.73
CREB3O43889 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CREB3O43889 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CREB3O43889 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CREB3O43889 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CREB3O43889 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.63■□□□□ 0.73
CREB3O43889 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.63■□□□□ 0.73
CREB3O43889 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.63■□□□□ 0.73
CREB3O43889 RBM17P1-201ENST00000453646 1190 ntBASIC19.63■□□□□ 0.73
CREB3O43889 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CREB3O43889 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CREB3O43889 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.63■□□□□ 0.73
CREB3O43889 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.63■□□□□ 0.73
CREB3O43889 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
CREB3O43889 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.63■□□□□ 0.73
CREB3O43889 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CREB3O43889 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CREB3O43889 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CREB3O43889 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CREB3O43889 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CREB3O43889 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CREB3O43889 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CREB3O43889 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CREB3O43889 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CREB3O43889 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CREB3O43889 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CREB3O43889 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CREB3O43889 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CREB3O43889 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.62■□□□□ 0.73
CREB3O43889 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.62■□□□□ 0.73
CREB3O43889 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.62■□□□□ 0.73
CREB3O43889 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
CREB3O43889 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CREB3O43889 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CREB3O43889 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CREB3O43889 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.62■□□□□ 0.73
CREB3O43889 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CREB3O43889 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.62■□□□□ 0.73
CREB3O43889 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.62■□□□□ 0.73
CREB3O43889 AP000525.1-201ENST00000608286 694 ntBASIC19.62■□□□□ 0.73
CREB3O43889 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CREB3O43889 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CREB3O43889 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CREB3O43889 TNXA-203ENST00000507684 2038 ntBASIC19.62■□□□□ 0.73
CREB3O43889 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CREB3O43889 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CREB3O43889 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CREB3O43889 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CREB3O43889 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CREB3O43889 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CREB3O43889 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CREB3O43889 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.61■□□□□ 0.73
CREB3O43889 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.61■□□□□ 0.73
CREB3O43889 AC096733.2-201ENST00000609937 1394 ntBASIC19.61■□□□□ 0.73
CREB3O43889 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CREB3O43889 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CREB3O43889 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CREB3O43889 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CREB3O43889 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CREB3O43889 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CREB3O43889 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CREB3O43889 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CREB3O43889 TSPY15P-201ENST00000457163 923 ntBASIC19.61■□□□□ 0.73
CREB3O43889 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CREB3O43889 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.61■□□□□ 0.73
CREB3O43889 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
CREB3O43889 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CREB3O43889 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CREB3O43889 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CREB3O43889 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
CREB3O43889 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.61■□□□□ 0.73
CREB3O43889 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CREB3O43889 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms