Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC22.48■■□□□ 1.19
FOXN1O15353 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC22.48■■□□□ 1.19
FOXN1O15353 RNA5SP419-201ENST00000515908 135 ntBASIC22.48■■□□□ 1.19
FOXN1O15353 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
FOXN1O15353 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC22.48■■□□□ 1.19
FOXN1O15353 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
FOXN1O15353 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
FOXN1O15353 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
FOXN1O15353 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC22.48■■□□□ 1.19
FOXN1O15353 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
FOXN1O15353 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
FOXN1O15353 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC22.47■■□□□ 1.19
FOXN1O15353 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
FOXN1O15353 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
FOXN1O15353 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
FOXN1O15353 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
FOXN1O15353 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
FOXN1O15353 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC22.47■■□□□ 1.19
FOXN1O15353 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC22.47■■□□□ 1.19
FOXN1O15353 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
FOXN1O15353 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC22.47■■□□□ 1.19
FOXN1O15353 CHCHD2P8-201ENST00000429873 447 ntBASIC22.47■■□□□ 1.19
FOXN1O15353 PHB2-202ENST00000440277 996 ntTSL 5 BASIC22.47■■□□□ 1.19
FOXN1O15353 KRT8P26-201ENST00000534154 1276 ntBASIC22.47■■□□□ 1.19
FOXN1O15353 AP001005.1-201ENST00000571755 1248 ntBASIC22.47■■□□□ 1.19
FOXN1O15353 AC055717.3-201ENST00000622967 595 ntBASIC22.47■■□□□ 1.19
FOXN1O15353 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
FOXN1O15353 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
FOXN1O15353 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
FOXN1O15353 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
FOXN1O15353 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
FOXN1O15353 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
FOXN1O15353 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC22.46■■□□□ 1.19
FOXN1O15353 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
FOXN1O15353 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC22.46■■□□□ 1.19
FOXN1O15353 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC22.46■■□□□ 1.19
FOXN1O15353 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
FOXN1O15353 DERL1-203ENST00000419562 918 ntTSL 2 BASIC22.46■■□□□ 1.19
FOXN1O15353 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
FOXN1O15353 LINC00265-3P-201ENST00000447588 903 ntBASIC22.46■■□□□ 1.19
FOXN1O15353 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
FOXN1O15353 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC22.46■■□□□ 1.19
FOXN1O15353 AC012615.1-201ENST00000565797 1299 ntBASIC22.46■■□□□ 1.19
FOXN1O15353 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC22.46■■□□□ 1.19
FOXN1O15353 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
FOXN1O15353 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC22.46■■□□□ 1.19
FOXN1O15353 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
FOXN1O15353 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
FOXN1O15353 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
FOXN1O15353 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
FOXN1O15353 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC22.46■■□□□ 1.19
FOXN1O15353 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
FOXN1O15353 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
FOXN1O15353 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
FOXN1O15353 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
FOXN1O15353 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
FOXN1O15353 DFFB-203ENST00000341385 572 ntTSL 5 BASIC22.45■■□□□ 1.18
FOXN1O15353 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
FOXN1O15353 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
FOXN1O15353 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC22.45■■□□□ 1.18
FOXN1O15353 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
FOXN1O15353 TPSP2-201ENST00000561760 610 ntBASIC22.45■■□□□ 1.18
FOXN1O15353 TERC-201ENST00000602385 541 ntBASIC22.45■■□□□ 1.18
FOXN1O15353 AL353801.3-201ENST00000609898 542 ntBASIC22.45■■□□□ 1.18
FOXN1O15353 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
FOXN1O15353 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC22.45■■□□□ 1.18
FOXN1O15353 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
FOXN1O15353 KRT8P20-201ENST00000423953 1409 ntBASIC22.45■■□□□ 1.18
FOXN1O15353 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
FOXN1O15353 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC22.45■■□□□ 1.18
FOXN1O15353 CD37-204ENST00000535669 1674 ntTSL 2 BASIC22.45■■□□□ 1.18
FOXN1O15353 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
FOXN1O15353 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
FOXN1O15353 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
FOXN1O15353 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
FOXN1O15353 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC22.45■■□□□ 1.18
FOXN1O15353 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
FOXN1O15353 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
FOXN1O15353 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
FOXN1O15353 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
FOXN1O15353 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
FOXN1O15353 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
FOXN1O15353 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
FOXN1O15353 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
FOXN1O15353 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
FOXN1O15353 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC22.44■■□□□ 1.18
FOXN1O15353 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
FOXN1O15353 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
FOXN1O15353 Z85996.1-201ENST00000494644 937 ntBASIC22.44■■□□□ 1.18
FOXN1O15353 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC22.44■■□□□ 1.18
FOXN1O15353 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC22.44■■□□□ 1.18
FOXN1O15353 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC22.44■■□□□ 1.18
FOXN1O15353 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
FOXN1O15353 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC22.44■■□□□ 1.18
FOXN1O15353 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
FOXN1O15353 TMEM179-206ENST00000616017 1645 ntBASIC22.44■■□□□ 1.18
FOXN1O15353 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC22.43■■□□□ 1.18
FOXN1O15353 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
FOXN1O15353 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
FOXN1O15353 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms