Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 MIR3180-4-201ENST00000582223 153 ntBASIC22.67■■□□□ 1.22
SEMA3EO15041 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC22.66■■□□□ 1.22
SEMA3EO15041 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SEMA3EO15041 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SEMA3EO15041 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC22.66■■□□□ 1.22
SEMA3EO15041 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SEMA3EO15041 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SEMA3EO15041 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SEMA3EO15041 AL645929.1-201ENST00000420084 975 ntBASIC22.66■■□□□ 1.22
SEMA3EO15041 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC22.66■■□□□ 1.22
SEMA3EO15041 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC22.66■■□□□ 1.22
SEMA3EO15041 AC010240.3-201ENST00000607688 395 ntBASIC22.66■■□□□ 1.22
SEMA3EO15041 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC22.66■■□□□ 1.22
SEMA3EO15041 AC079602.3-201ENST00000623931 403 ntBASIC22.66■■□□□ 1.22
SEMA3EO15041 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC22.66■■□□□ 1.22
SEMA3EO15041 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SEMA3EO15041 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
SEMA3EO15041 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
SEMA3EO15041 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
SEMA3EO15041 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
SEMA3EO15041 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SEMA3EO15041 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC22.66■■□□□ 1.22
SEMA3EO15041 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SEMA3EO15041 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC22.66■■□□□ 1.22
SEMA3EO15041 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC22.65■■□□□ 1.22
SEMA3EO15041 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
SEMA3EO15041 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC22.65■■□□□ 1.22
SEMA3EO15041 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SEMA3EO15041 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC22.65■■□□□ 1.22
SEMA3EO15041 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
SEMA3EO15041 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC22.65■■□□□ 1.22
SEMA3EO15041 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SEMA3EO15041 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SEMA3EO15041 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC22.65■■□□□ 1.22
SEMA3EO15041 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC22.65■■□□□ 1.22
SEMA3EO15041 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC22.65■■□□□ 1.22
SEMA3EO15041 AC069148.1-201ENST00000608741 768 ntBASIC22.65■■□□□ 1.22
SEMA3EO15041 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC22.65■■□□□ 1.22
SEMA3EO15041 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC22.65■■□□□ 1.22
SEMA3EO15041 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SEMA3EO15041 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC22.65■■□□□ 1.22
SEMA3EO15041 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
SEMA3EO15041 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SEMA3EO15041 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC22.65■■□□□ 1.22
SEMA3EO15041 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC22.65■■□□□ 1.22
SEMA3EO15041 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
SEMA3EO15041 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
SEMA3EO15041 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
SEMA3EO15041 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
SEMA3EO15041 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SEMA3EO15041 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SEMA3EO15041 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC22.64■■□□□ 1.21
SEMA3EO15041 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
SEMA3EO15041 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC22.64■■□□□ 1.21
SEMA3EO15041 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC22.64■■□□□ 1.21
SEMA3EO15041 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC22.64■■□□□ 1.21
SEMA3EO15041 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC22.64■■□□□ 1.21
SEMA3EO15041 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC22.64■■□□□ 1.21
SEMA3EO15041 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SEMA3EO15041 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SEMA3EO15041 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC22.64■■□□□ 1.21
SEMA3EO15041 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
SEMA3EO15041 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SEMA3EO15041 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
SEMA3EO15041 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC22.63■■□□□ 1.21
SEMA3EO15041 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
SEMA3EO15041 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
SEMA3EO15041 AC006333.2-201ENST00000607957 2099 ntBASIC22.63■■□□□ 1.21
SEMA3EO15041 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SEMA3EO15041 HEIH-201ENST00000623091 1652 ntBASIC22.63■■□□□ 1.21
SEMA3EO15041 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SEMA3EO15041 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SEMA3EO15041 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SEMA3EO15041 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC22.63■■□□□ 1.21
SEMA3EO15041 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
SEMA3EO15041 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
SEMA3EO15041 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SEMA3EO15041 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC22.63■■□□□ 1.21
SEMA3EO15041 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC22.63■■□□□ 1.21
SEMA3EO15041 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC22.63■■□□□ 1.21
SEMA3EO15041 AL136038.4-201ENST00000603606 1261 ntBASIC22.63■■□□□ 1.21
SEMA3EO15041 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
SEMA3EO15041 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
SEMA3EO15041 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC22.63■■□□□ 1.21
SEMA3EO15041 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC22.63■■□□□ 1.21
SEMA3EO15041 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
SEMA3EO15041 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SEMA3EO15041 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
SEMA3EO15041 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SEMA3EO15041 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SEMA3EO15041 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC22.63■■□□□ 1.21
SEMA3EO15041 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SEMA3EO15041 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
SEMA3EO15041 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC22.62■■□□□ 1.21
SEMA3EO15041 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
SEMA3EO15041 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
SEMA3EO15041 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SEMA3EO15041 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC22.62■■□□□ 1.21
SEMA3EO15041 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
SEMA3EO15041 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms