Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC20.02■□□□□ 0.8
SOX1O00570 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SOX1O00570 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SOX1O00570 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SOX1O00570 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SOX1O00570 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
SOX1O00570 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
SOX1O00570 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
SOX1O00570 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SOX1O00570 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
SOX1O00570 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
SOX1O00570 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
SOX1O00570 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SOX1O00570 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SOX1O00570 RCN1P2-201ENST00000398357 915 ntBASIC20.01■□□□□ 0.79
SOX1O00570 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC20.01■□□□□ 0.79
SOX1O00570 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
SOX1O00570 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.01■□□□□ 0.79
SOX1O00570 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.01■□□□□ 0.79
SOX1O00570 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.01■□□□□ 0.79
SOX1O00570 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.01■□□□□ 0.79
SOX1O00570 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SOX1O00570 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SOX1O00570 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20■□□□□ 0.79
SOX1O00570 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SOX1O00570 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SOX1O00570 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SOX1O00570 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20■□□□□ 0.79
SOX1O00570 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SOX1O00570 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20■□□□□ 0.79
SOX1O00570 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SOX1O00570 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20■□□□□ 0.79
SOX1O00570 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SOX1O00570 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20■□□□□ 0.79
SOX1O00570 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SOX1O00570 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC20■□□□□ 0.79
SOX1O00570 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20■□□□□ 0.79
SOX1O00570 UNC93B6-202ENST00000528242 690 ntBASIC20■□□□□ 0.79
SOX1O00570 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC20■□□□□ 0.79
SOX1O00570 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC20■□□□□ 0.79
SOX1O00570 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC20■□□□□ 0.79
SOX1O00570 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC20■□□□□ 0.79
SOX1O00570 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SOX1O00570 AL096865.1-201ENST00000606796 927 ntBASIC20■□□□□ 0.79
SOX1O00570 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20■□□□□ 0.79
SOX1O00570 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
SOX1O00570 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20■□□□□ 0.79
SOX1O00570 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SOX1O00570 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SOX1O00570 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SOX1O00570 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.99■□□□□ 0.79
SOX1O00570 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
SOX1O00570 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.99■□□□□ 0.79
SOX1O00570 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.99■□□□□ 0.79
SOX1O00570 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SOX1O00570 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SOX1O00570 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SOX1O00570 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SOX1O00570 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SOX1O00570 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SOX1O00570 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.99■□□□□ 0.79
SOX1O00570 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.99■□□□□ 0.79
SOX1O00570 YBX1P5-201ENST00000509441 847 ntBASIC19.99■□□□□ 0.79
SOX1O00570 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.99■□□□□ 0.79
SOX1O00570 GREM1-201ENST00000560677 623 ntTSL 4 BASIC19.99■□□□□ 0.79
SOX1O00570 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.99■□□□□ 0.79
SOX1O00570 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.99■□□□□ 0.79
SOX1O00570 MIR4469-201ENST00000583919 79 ntBASIC19.99■□□□□ 0.79
SOX1O00570 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SOX1O00570 AL035252.4-201ENST00000624174 288 ntBASIC19.99■□□□□ 0.79
SOX1O00570 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SOX1O00570 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SOX1O00570 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.99■□□□□ 0.79
SOX1O00570 KRT8P3-201ENST00000519669 1449 ntBASIC19.99■□□□□ 0.79
SOX1O00570 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.99■□□□□ 0.79
SOX1O00570 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
SOX1O00570 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.99■□□□□ 0.79
SOX1O00570 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.98■□□□□ 0.79
SOX1O00570 AL353692.3-201ENST00000407031 1396 ntBASIC19.98■□□□□ 0.79
SOX1O00570 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.98■□□□□ 0.79
SOX1O00570 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.98■□□□□ 0.79
SOX1O00570 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SOX1O00570 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SOX1O00570 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SOX1O00570 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SOX1O00570 AC254562.1-201ENST00000417586 456 ntBASIC19.98■□□□□ 0.79
SOX1O00570 AC007274.1-201ENST00000439805 662 ntBASIC19.98■□□□□ 0.79
SOX1O00570 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.98■□□□□ 0.79
SOX1O00570 AC005829.1-201ENST00000570002 483 ntBASIC19.98■□□□□ 0.79
SOX1O00570 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.98■□□□□ 0.79
SOX1O00570 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SOX1O00570 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SOX1O00570 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.98■□□□□ 0.79
SOX1O00570 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SOX1O00570 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
SOX1O00570 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SOX1O00570 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SOX1O00570 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
SOX1O00570 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SOX1O00570 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms