Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 KRT8P8-201ENST00000434750 1448 ntBASIC16.02■□□□□ 0.16
SDCBPO00560 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SDCBPO00560 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SDCBPO00560 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SDCBPO00560 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.02■□□□□ 0.16
SDCBPO00560 AC068880.1-201ENST00000507289 2297 ntBASIC16.02■□□□□ 0.16
SDCBPO00560 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SDCBPO00560 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.02■□□□□ 0.16
SDCBPO00560 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
SDCBPO00560 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
SDCBPO00560 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SDCBPO00560 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.02■□□□□ 0.16
SDCBPO00560 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
SDCBPO00560 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
SDCBPO00560 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.02■□□□□ 0.16
SDCBPO00560 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.02■□□□□ 0.16
SDCBPO00560 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.02■□□□□ 0.16
SDCBPO00560 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.02■□□□□ 0.16
SDCBPO00560 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.02■□□□□ 0.16
SDCBPO00560 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.02■□□□□ 0.16
SDCBPO00560 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
SDCBPO00560 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
SDCBPO00560 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SDCBPO00560 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SDCBPO00560 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
SDCBPO00560 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.02■□□□□ 0.15
SDCBPO00560 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
SDCBPO00560 ANO7L1-203ENST00000602586 1720 ntBASIC16.02■□□□□ 0.15
SDCBPO00560 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SDCBPO00560 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.15
SDCBPO00560 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SDCBPO00560 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SDCBPO00560 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SDCBPO00560 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.01■□□□□ 0.15
SDCBPO00560 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SDCBPO00560 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SDCBPO00560 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SDCBPO00560 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
SDCBPO00560 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.01■□□□□ 0.15
SDCBPO00560 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
SDCBPO00560 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SDCBPO00560 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SDCBPO00560 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SDCBPO00560 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SDCBPO00560 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SDCBPO00560 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SDCBPO00560 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SDCBPO00560 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SDCBPO00560 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.01■□□□□ 0.15
SDCBPO00560 TUBB8P6-201ENST00000436895 1288 ntBASIC16.01■□□□□ 0.15
SDCBPO00560 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.01■□□□□ 0.15
SDCBPO00560 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SDCBPO00560 AP003097.1-201ENST00000530657 1135 ntBASIC16.01■□□□□ 0.15
SDCBPO00560 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.01■□□□□ 0.15
SDCBPO00560 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.01■□□□□ 0.15
SDCBPO00560 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SDCBPO00560 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.01■□□□□ 0.15
SDCBPO00560 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SDCBPO00560 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.01■□□□□ 0.15
SDCBPO00560 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.01■□□□□ 0.15
SDCBPO00560 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SDCBPO00560 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SDCBPO00560 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.01■□□□□ 0.15
SDCBPO00560 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.01■□□□□ 0.15
SDCBPO00560 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SDCBPO00560 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SDCBPO00560 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SDCBPO00560 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SDCBPO00560 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
SDCBPO00560 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.01■□□□□ 0.15
SDCBPO00560 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SDCBPO00560 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SDCBPO00560 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SDCBPO00560 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.01■□□□□ 0.15
SDCBPO00560 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SDCBPO00560 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.01■□□□□ 0.15
SDCBPO00560 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.01■□□□□ 0.15
SDCBPO00560 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16■□□□□ 0.15
SDCBPO00560 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
SDCBPO00560 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
SDCBPO00560 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16■□□□□ 0.15
SDCBPO00560 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SDCBPO00560 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16■□□□□ 0.15
SDCBPO00560 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16■□□□□ 0.15
SDCBPO00560 FEM1AP3-201ENST00000403722 1741 ntBASIC16■□□□□ 0.15
SDCBPO00560 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16■□□□□ 0.15
SDCBPO00560 NOC2LP2-201ENST00000407594 1944 ntBASIC16■□□□□ 0.15
SDCBPO00560 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SDCBPO00560 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
SDCBPO00560 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
SDCBPO00560 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16■□□□□ 0.15
SDCBPO00560 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16■□□□□ 0.15
SDCBPO00560 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC16■□□□□ 0.15
SDCBPO00560 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16■□□□□ 0.15
SDCBPO00560 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16■□□□□ 0.15
SDCBPO00560 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC16■□□□□ 0.15
SDCBPO00560 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SDCBPO00560 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SDCBPO00560 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SDCBPO00560 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms