Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DDX39AO00148 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DDX39AO00148 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
DDX39AO00148 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
DDX39AO00148 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX39AO00148 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC21.17■□□□□ 0.98
DDX39AO00148 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX39AO00148 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
DDX39AO00148 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX39AO00148 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.17■□□□□ 0.98
DDX39AO00148 AC092647.4-201ENST00000457211 535 ntBASIC21.17■□□□□ 0.98
DDX39AO00148 AL359075.1-203ENST00000462729 1002 ntBASIC21.17■□□□□ 0.98
DDX39AO00148 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.17■□□□□ 0.98
DDX39AO00148 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.17■□□□□ 0.98
DDX39AO00148 AC087388.1-201ENST00000571370 1112 ntBASIC21.17■□□□□ 0.98
DDX39AO00148 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC21.17■□□□□ 0.98
DDX39AO00148 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
DDX39AO00148 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC21.17■□□□□ 0.98
DDX39AO00148 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX39AO00148 AC008556.1-201ENST00000610908 2040 ntBASIC21.17■□□□□ 0.98
DDX39AO00148 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
DDX39AO00148 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX39AO00148 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX39AO00148 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX39AO00148 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX39AO00148 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX39AO00148 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.16■□□□□ 0.98
DDX39AO00148 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC21.16■□□□□ 0.98
DDX39AO00148 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC21.16■□□□□ 0.98
DDX39AO00148 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
DDX39AO00148 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
DDX39AO00148 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
DDX39AO00148 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX39AO00148 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX39AO00148 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX39AO00148 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC21.16■□□□□ 0.98
DDX39AO00148 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC21.16■□□□□ 0.98
DDX39AO00148 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.16■□□□□ 0.98
DDX39AO00148 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
DDX39AO00148 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC21.16■□□□□ 0.98
DDX39AO00148 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX39AO00148 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX39AO00148 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX39AO00148 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX39AO00148 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX39AO00148 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX39AO00148 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
DDX39AO00148 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
DDX39AO00148 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC21.16■□□□□ 0.98
DDX39AO00148 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC21.15■□□□□ 0.98
DDX39AO00148 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC21.15■□□□□ 0.98
DDX39AO00148 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC21.15■□□□□ 0.98
DDX39AO00148 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDX39AO00148 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDX39AO00148 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC21.15■□□□□ 0.98
DDX39AO00148 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDX39AO00148 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
DDX39AO00148 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDX39AO00148 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
DDX39AO00148 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC21.15■□□□□ 0.98
DDX39AO00148 GCSHP2-201ENST00000560971 527 ntBASIC21.15■□□□□ 0.98
DDX39AO00148 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC21.15■□□□□ 0.98
DDX39AO00148 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.15■□□□□ 0.98
DDX39AO00148 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC21.15■□□□□ 0.98
DDX39AO00148 NT5C-211ENST00000582170 653 ntTSL 3 BASIC21.15■□□□□ 0.98
DDX39AO00148 MIR3180-5-201ENST00000583743 153 ntBASIC21.15■□□□□ 0.98
DDX39AO00148 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDX39AO00148 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC21.15■□□□□ 0.98
DDX39AO00148 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
DDX39AO00148 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
DDX39AO00148 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDX39AO00148 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDX39AO00148 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDX39AO00148 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21.15■□□□□ 0.98
DDX39AO00148 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC21.15■□□□□ 0.98
DDX39AO00148 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDX39AO00148 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC21.15■□□□□ 0.98
DDX39AO00148 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
DDX39AO00148 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
DDX39AO00148 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
DDX39AO00148 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
DDX39AO00148 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
DDX39AO00148 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
DDX39AO00148 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
DDX39AO00148 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
DDX39AO00148 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC21.14■□□□□ 0.97
DDX39AO00148 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.14■□□□□ 0.97
DDX39AO00148 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC21.14■□□□□ 0.97
DDX39AO00148 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
DDX39AO00148 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC21.14■□□□□ 0.97
DDX39AO00148 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC21.14■□□□□ 0.97
DDX39AO00148 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DDX39AO00148 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DDX39AO00148 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DDX39AO00148 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDX39AO00148 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDX39AO00148 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.13■□□□□ 0.97
DDX39AO00148 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDX39AO00148 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
DDX39AO00148 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms