Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.87■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.87■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.87■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.87■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.87■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.87■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.87■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 AL032819.2-201ENST00000624543 2162 ntBASIC18.86■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.86■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.86■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.86■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.86■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.86■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.86■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.86■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.86■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.85■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.85■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 KRT8P32-201ENST00000512863 1461 ntBASIC18.85■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 LINC01311-201ENST00000565162 1445 ntBASIC18.85■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.85■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.85■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 PCED1CP-201ENST00000419887 785 ntBASIC18.85■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 RASA4DP-201ENST00000460726 1199 ntBASIC18.85■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 FAM86EP-206ENST00000510506 987 ntBASIC18.85■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.85■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 AC093484.2-201ENST00000580996 2166 ntBASIC18.85■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.85■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.84■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 AC008556.1-201ENST00000610908 2040 ntBASIC18.84■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 KRT8P7-201ENST00000533003 1432 ntBASIC18.84■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 IER3-202ENST00000376377 1350 ntBASIC18.84■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 UPK3BP1-201ENST00000428678 509 ntBASIC18.84■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.84■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.84■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.84■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 VENTXP5-201ENST00000523979 775 ntBASIC18.84■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.84■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 ZNF444P1-201ENST00000559497 298 ntBASIC18.84■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.84■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms