Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TBC1D3FA6NER0 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TBC1D3FA6NER0 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TBC1D3FA6NER0 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TBC1D3FA6NER0 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.76■□□□□ 0.59
TBC1D3FA6NER0 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.76■□□□□ 0.59
TBC1D3FA6NER0 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.75■□□□□ 0.59
TBC1D3FA6NER0 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TBC1D3FA6NER0 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TBC1D3FA6NER0 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.75■□□□□ 0.59
TBC1D3FA6NER0 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TBC1D3FA6NER0 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
TBC1D3FA6NER0 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.75■□□□□ 0.59
TBC1D3FA6NER0 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TBC1D3FA6NER0 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.75■□□□□ 0.59
TBC1D3FA6NER0 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.75■□□□□ 0.59
TBC1D3FA6NER0 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TBC1D3FA6NER0 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
TBC1D3FA6NER0 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TBC1D3FA6NER0 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TBC1D3FA6NER0 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TBC1D3FA6NER0 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.75■□□□□ 0.59
TBC1D3FA6NER0 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.75■□□□□ 0.59
TBC1D3FA6NER0 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.75■□□□□ 0.59
TBC1D3FA6NER0 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.75■□□□□ 0.59
TBC1D3FA6NER0 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TBC1D3FA6NER0 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TBC1D3FA6NER0 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.75■□□□□ 0.59
TBC1D3FA6NER0 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TBC1D3FA6NER0 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
TBC1D3FA6NER0 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
TBC1D3FA6NER0 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TBC1D3FA6NER0 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TBC1D3FA6NER0 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.75■□□□□ 0.59
TBC1D3FA6NER0 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TBC1D3FA6NER0 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TBC1D3FA6NER0 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TBC1D3FA6NER0 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TBC1D3FA6NER0 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TBC1D3FA6NER0 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TBC1D3FA6NER0 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.74■□□□□ 0.59
TBC1D3FA6NER0 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.74■□□□□ 0.59
TBC1D3FA6NER0 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TBC1D3FA6NER0 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.74■□□□□ 0.59
TBC1D3FA6NER0 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
TBC1D3FA6NER0 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TBC1D3FA6NER0 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TBC1D3FA6NER0 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.74■□□□□ 0.59
TBC1D3FA6NER0 AL512353.2-201ENST00000448759 1962 ntBASIC18.74■□□□□ 0.59
TBC1D3FA6NER0 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TBC1D3FA6NER0 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TBC1D3FA6NER0 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TBC1D3FA6NER0 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.74■□□□□ 0.59
TBC1D3FA6NER0 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TBC1D3FA6NER0 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TBC1D3FA6NER0 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
TBC1D3FA6NER0 AC092597.1-201ENST00000487352 616 ntBASIC18.74■□□□□ 0.59
TBC1D3FA6NER0 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.74■□□□□ 0.59
TBC1D3FA6NER0 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
TBC1D3FA6NER0 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.74■□□□□ 0.59
TBC1D3FA6NER0 AC069148.1-201ENST00000608741 768 ntBASIC18.74■□□□□ 0.59
TBC1D3FA6NER0 AC112497.1-201ENST00000624824 639 ntBASIC18.74■□□□□ 0.59
TBC1D3FA6NER0 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TBC1D3FA6NER0 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TBC1D3FA6NER0 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TBC1D3FA6NER0 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TBC1D3FA6NER0 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
TBC1D3FA6NER0 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TBC1D3FA6NER0 FEM1AP3-201ENST00000403722 1741 ntBASIC18.74■□□□□ 0.59
TBC1D3FA6NER0 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TBC1D3FA6NER0 RCC2P3-201ENST00000418112 1537 ntBASIC18.74■□□□□ 0.59
TBC1D3FA6NER0 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TBC1D3FA6NER0 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
TBC1D3FA6NER0 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TBC1D3FA6NER0 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.73■□□□□ 0.59
TBC1D3FA6NER0 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.73■□□□□ 0.59
TBC1D3FA6NER0 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.73■□□□□ 0.59
TBC1D3FA6NER0 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TBC1D3FA6NER0 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TBC1D3FA6NER0 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TBC1D3FA6NER0 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TBC1D3FA6NER0 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TBC1D3FA6NER0 HBZP1-201ENST00000354915 429 ntBASIC18.73■□□□□ 0.59
TBC1D3FA6NER0 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.73■□□□□ 0.59
TBC1D3FA6NER0 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TBC1D3FA6NER0 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.73■□□□□ 0.59
TBC1D3FA6NER0 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.73■□□□□ 0.59
TBC1D3FA6NER0 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.73■□□□□ 0.59
TBC1D3FA6NER0 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.73■□□□□ 0.59
TBC1D3FA6NER0 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.73■□□□□ 0.59
TBC1D3FA6NER0 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.73■□□□□ 0.59
TBC1D3FA6NER0 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.73■□□□□ 0.59
TBC1D3FA6NER0 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.73■□□□□ 0.59
TBC1D3FA6NER0 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TBC1D3FA6NER0 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TBC1D3FA6NER0 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
TBC1D3FA6NER0 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TBC1D3FA6NER0 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.73■□□□□ 0.59
TBC1D3FA6NER0 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TBC1D3FA6NER0 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms