Protein–RNA interactions for Protein: A6H8M9

CDHR4, Cadherin-related family member 4, humanhuman

Predictions only

Length 788 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4A6H8M9 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDHR4A6H8M9 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDHR4A6H8M9 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDHR4A6H8M9 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.32■□□□□ 0.36
CDHR4A6H8M9 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CDHR4A6H8M9 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.32■□□□□ 0.36
CDHR4A6H8M9 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDHR4A6H8M9 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.32■□□□□ 0.36
CDHR4A6H8M9 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDHR4A6H8M9 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDHR4A6H8M9 MESTP1-201ENST00000404287 994 ntBASIC17.32■□□□□ 0.36
CDHR4A6H8M9 FAM197Y1-201ENST00000421178 764 ntBASIC17.32■□□□□ 0.36
CDHR4A6H8M9 GCSHP5-201ENST00000443090 522 ntBASIC17.32■□□□□ 0.36
CDHR4A6H8M9 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.32■□□□□ 0.36
CDHR4A6H8M9 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.32■□□□□ 0.36
CDHR4A6H8M9 AC068587.9-201ENST00000641814 219 ntBASIC17.32■□□□□ 0.36
CDHR4A6H8M9 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.32■□□□□ 0.36
CDHR4A6H8M9 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.32■□□□□ 0.36
CDHR4A6H8M9 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDHR4A6H8M9 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
CDHR4A6H8M9 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CDHR4A6H8M9 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDHR4A6H8M9 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.32■□□□□ 0.36
CDHR4A6H8M9 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDHR4A6H8M9 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.32■□□□□ 0.36
CDHR4A6H8M9 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.31■□□□□ 0.36
CDHR4A6H8M9 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDHR4A6H8M9 KRT8P32-201ENST00000512863 1461 ntBASIC17.31■□□□□ 0.36
CDHR4A6H8M9 FSCN1P1-201ENST00000568912 1481 ntBASIC17.31■□□□□ 0.36
CDHR4A6H8M9 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDHR4A6H8M9 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDHR4A6H8M9 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDHR4A6H8M9 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDHR4A6H8M9 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.31■□□□□ 0.36
CDHR4A6H8M9 AC005082.1-201ENST00000413042 2259 ntBASIC17.31■□□□□ 0.36
CDHR4A6H8M9 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDHR4A6H8M9 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDHR4A6H8M9 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.31■□□□□ 0.36
CDHR4A6H8M9 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDHR4A6H8M9 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDHR4A6H8M9 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDHR4A6H8M9 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDHR4A6H8M9 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDHR4A6H8M9 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.31■□□□□ 0.36
CDHR4A6H8M9 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.31■□□□□ 0.36
CDHR4A6H8M9 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.31■□□□□ 0.36
CDHR4A6H8M9 UBE2SP1-201ENST00000450587 669 ntBASIC17.31■□□□□ 0.36
CDHR4A6H8M9 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDHR4A6H8M9 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CDHR4A6H8M9 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDHR4A6H8M9 CD177P1-201ENST00000606252 935 ntBASIC17.31■□□□□ 0.36
CDHR4A6H8M9 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.31■□□□□ 0.36
CDHR4A6H8M9 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDHR4A6H8M9 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDHR4A6H8M9 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.31■□□□□ 0.36
CDHR4A6H8M9 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDHR4A6H8M9 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.31■□□□□ 0.36
CDHR4A6H8M9 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDHR4A6H8M9 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDHR4A6H8M9 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDHR4A6H8M9 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CDHR4A6H8M9 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDHR4A6H8M9 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDHR4A6H8M9 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDHR4A6H8M9 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.3■□□□□ 0.36
CDHR4A6H8M9 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.3■□□□□ 0.36
CDHR4A6H8M9 AC090164.3-201ENST00000610780 2143 ntBASIC17.3■□□□□ 0.36
CDHR4A6H8M9 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CDHR4A6H8M9 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.3■□□□□ 0.36
CDHR4A6H8M9 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDHR4A6H8M9 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDHR4A6H8M9 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDHR4A6H8M9 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDHR4A6H8M9 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDHR4A6H8M9 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDHR4A6H8M9 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDHR4A6H8M9 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDHR4A6H8M9 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
CDHR4A6H8M9 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDHR4A6H8M9 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.3■□□□□ 0.36
CDHR4A6H8M9 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDHR4A6H8M9 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
CDHR4A6H8M9 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDHR4A6H8M9 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.3■□□□□ 0.36
CDHR4A6H8M9 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
CDHR4A6H8M9 MTMR9LP-203ENST00000426597 1545 ntBASIC17.3■□□□□ 0.36
CDHR4A6H8M9 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.3■□□□□ 0.36
CDHR4A6H8M9 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDHR4A6H8M9 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CDHR4A6H8M9 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.3■□□□□ 0.36
CDHR4A6H8M9 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDHR4A6H8M9 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.29■□□□□ 0.36
CDHR4A6H8M9 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.29■□□□□ 0.36
CDHR4A6H8M9 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.29■□□□□ 0.36
CDHR4A6H8M9 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
CDHR4A6H8M9 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDHR4A6H8M9 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.29■□□□□ 0.36
CDHR4A6H8M9 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDHR4A6H8M9 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDHR4A6H8M9 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms