Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 KRT18P3-201ENST00000451602 1288 ntBASIC17.97■□□□□ 0.47
CNOT1A5YKK6 AC011840.4-201ENST00000578471 627 ntBASIC17.97■□□□□ 0.47
CNOT1A5YKK6 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CNOT1A5YKK6 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CNOT1A5YKK6 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.97■□□□□ 0.47
CNOT1A5YKK6 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CNOT1A5YKK6 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CNOT1A5YKK6 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CNOT1A5YKK6 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
CNOT1A5YKK6 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CNOT1A5YKK6 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.97■□□□□ 0.47
CNOT1A5YKK6 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.97■□□□□ 0.47
CNOT1A5YKK6 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CNOT1A5YKK6 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CNOT1A5YKK6 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CNOT1A5YKK6 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CNOT1A5YKK6 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CNOT1A5YKK6 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.96■□□□□ 0.47
CNOT1A5YKK6 POM121L3P-201ENST00000419331 1163 ntBASIC17.96■□□□□ 0.47
CNOT1A5YKK6 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.96■□□□□ 0.47
CNOT1A5YKK6 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.96■□□□□ 0.47
CNOT1A5YKK6 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CNOT1A5YKK6 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNOT1A5YKK6 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CNOT1A5YKK6 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNOT1A5YKK6 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CNOT1A5YKK6 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNOT1A5YKK6 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CNOT1A5YKK6 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNOT1A5YKK6 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CNOT1A5YKK6 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CNOT1A5YKK6 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
CNOT1A5YKK6 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CNOT1A5YKK6 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNOT1A5YKK6 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.96■□□□□ 0.47
CNOT1A5YKK6 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.96■□□□□ 0.47
CNOT1A5YKK6 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.96■□□□□ 0.47
CNOT1A5YKK6 RNA5SP415-201ENST00000517246 115 ntBASIC17.96■□□□□ 0.47
CNOT1A5YKK6 GPR32P1-201ENST00000601788 811 ntBASIC17.96■□□□□ 0.47
CNOT1A5YKK6 AC116407.3-201ENST00000623905 1129 ntBASIC17.96■□□□□ 0.47
CNOT1A5YKK6 AC083906.6-201ENST00000641366 219 ntBASIC17.96■□□□□ 0.47
CNOT1A5YKK6 AC079781.4-201ENST00000641908 219 ntBASIC17.96■□□□□ 0.47
CNOT1A5YKK6 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNOT1A5YKK6 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNOT1A5YKK6 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CNOT1A5YKK6 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
CNOT1A5YKK6 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CNOT1A5YKK6 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CNOT1A5YKK6 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.95■□□□□ 0.46
CNOT1A5YKK6 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.95■□□□□ 0.46
CNOT1A5YKK6 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CNOT1A5YKK6 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.95■□□□□ 0.46
CNOT1A5YKK6 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.95■□□□□ 0.46
CNOT1A5YKK6 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNOT1A5YKK6 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNOT1A5YKK6 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNOT1A5YKK6 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.95■□□□□ 0.46
CNOT1A5YKK6 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CNOT1A5YKK6 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.95■□□□□ 0.46
CNOT1A5YKK6 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CNOT1A5YKK6 AC026310.3-201ENST00000625186 2373 ntBASIC17.95■□□□□ 0.46
CNOT1A5YKK6 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.95■□□□□ 0.46
CNOT1A5YKK6 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.95■□□□□ 0.46
CNOT1A5YKK6 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CNOT1A5YKK6 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNOT1A5YKK6 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNOT1A5YKK6 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNOT1A5YKK6 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.95■□□□□ 0.46
CNOT1A5YKK6 MINOS1P3-201ENST00000457048 203 ntBASIC17.95■□□□□ 0.46
CNOT1A5YKK6 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.95■□□□□ 0.46
CNOT1A5YKK6 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.95■□□□□ 0.46
CNOT1A5YKK6 FAM215A-202ENST00000632077 792 ntBASIC17.95■□□□□ 0.46
CNOT1A5YKK6 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNOT1A5YKK6 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNOT1A5YKK6 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CNOT1A5YKK6 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CNOT1A5YKK6 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNOT1A5YKK6 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CNOT1A5YKK6 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNOT1A5YKK6 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNOT1A5YKK6 AC034105.1-201ENST00000563488 319 ntBASIC17.94■□□□□ 0.46
CNOT1A5YKK6 MIR3197-201ENST00000582241 73 ntBASIC17.94■□□□□ 0.46
CNOT1A5YKK6 AC010240.3-201ENST00000607688 395 ntBASIC17.94■□□□□ 0.46
CNOT1A5YKK6 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.94■□□□□ 0.46
CNOT1A5YKK6 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.94■□□□□ 0.46
CNOT1A5YKK6 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CNOT1A5YKK6 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNOT1A5YKK6 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CNOT1A5YKK6 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNOT1A5YKK6 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CNOT1A5YKK6 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNOT1A5YKK6 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CNOT1A5YKK6 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CNOT1A5YKK6 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CNOT1A5YKK6 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CNOT1A5YKK6 METTL21AP1-201ENST00000438852 635 ntBASIC17.94■□□□□ 0.46
CNOT1A5YKK6 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.94■□□□□ 0.46
CNOT1A5YKK6 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNOT1A5YKK6 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.94■□□□□ 0.46
CNOT1A5YKK6 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms