Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC25.5■■□□□ 1.67
SBNO1A3KN83 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC25.5■■□□□ 1.67
SBNO1A3KN83 AF238378.1-201ENST00000526806 358 ntBASIC25.5■■□□□ 1.67
SBNO1A3KN83 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
SBNO1A3KN83 CCNC-219ENST00000627680 896 ntTSL 5 BASIC25.5■■□□□ 1.67
SBNO1A3KN83 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
SBNO1A3KN83 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC25.5■■□□□ 1.67
SBNO1A3KN83 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SBNO1A3KN83 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
SBNO1A3KN83 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
SBNO1A3KN83 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC25.5■■□□□ 1.67
SBNO1A3KN83 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC25.5■■□□□ 1.67
SBNO1A3KN83 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC25.5■■□□□ 1.67
SBNO1A3KN83 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC25.5■■□□□ 1.67
SBNO1A3KN83 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
SBNO1A3KN83 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
SBNO1A3KN83 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC25.49■■□□□ 1.67
SBNO1A3KN83 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC25.49■■□□□ 1.67
SBNO1A3KN83 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SBNO1A3KN83 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SBNO1A3KN83 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC25.49■■□□□ 1.67
SBNO1A3KN83 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC25.49■■□□□ 1.67
SBNO1A3KN83 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC25.49■■□□□ 1.67
SBNO1A3KN83 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SBNO1A3KN83 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC25.49■■□□□ 1.67
SBNO1A3KN83 AP005901.3-202ENST00000581653 237 ntBASIC25.49■■□□□ 1.67
SBNO1A3KN83 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SBNO1A3KN83 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SBNO1A3KN83 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
SBNO1A3KN83 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SBNO1A3KN83 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC25.49■■□□□ 1.67
SBNO1A3KN83 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC25.49■■□□□ 1.67
SBNO1A3KN83 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC25.49■■□□□ 1.67
SBNO1A3KN83 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC25.49■■□□□ 1.67
SBNO1A3KN83 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SBNO1A3KN83 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SBNO1A3KN83 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SBNO1A3KN83 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC25.49■■□□□ 1.67
SBNO1A3KN83 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
SBNO1A3KN83 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC25.48■■□□□ 1.67
SBNO1A3KN83 IL9RP2-201ENST00000423948 1312 ntBASIC25.48■■□□□ 1.67
SBNO1A3KN83 NSUN5P1-202ENST00000421140 1535 ntBASIC25.48■■□□□ 1.67
SBNO1A3KN83 NSUN5P2-203ENST00000457352 1529 ntBASIC25.48■■□□□ 1.67
SBNO1A3KN83 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
SBNO1A3KN83 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SBNO1A3KN83 LSM5-204ENST00000409909 740 ntTSL 2 BASIC25.48■■□□□ 1.67
SBNO1A3KN83 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC25.48■■□□□ 1.67
SBNO1A3KN83 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC25.48■■□□□ 1.67
SBNO1A3KN83 MIR3180-4-201ENST00000582223 153 ntBASIC25.48■■□□□ 1.67
SBNO1A3KN83 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
SBNO1A3KN83 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC25.48■■□□□ 1.67
SBNO1A3KN83 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC25.48■■□□□ 1.67
SBNO1A3KN83 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
SBNO1A3KN83 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC25.48■■□□□ 1.67
SBNO1A3KN83 RCC2P3-201ENST00000418112 1537 ntBASIC25.48■■□□□ 1.67
SBNO1A3KN83 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SBNO1A3KN83 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC25.47■■□□□ 1.67
SBNO1A3KN83 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
SBNO1A3KN83 AP001005.1-201ENST00000571755 1248 ntBASIC25.47■■□□□ 1.67
SBNO1A3KN83 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC25.47■■□□□ 1.67
SBNO1A3KN83 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SBNO1A3KN83 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC25.47■■□□□ 1.67
SBNO1A3KN83 AF228730.7-201ENST00000641842 219 ntBASIC25.47■■□□□ 1.67
SBNO1A3KN83 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC25.47■■□□□ 1.67
SBNO1A3KN83 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC25.47■■□□□ 1.67
SBNO1A3KN83 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC25.47■■□□□ 1.67
SBNO1A3KN83 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC25.47■■□□□ 1.67
SBNO1A3KN83 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SBNO1A3KN83 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
SBNO1A3KN83 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC25.47■■□□□ 1.67
SBNO1A3KN83 EFS-203ENST00000429593 2610 ntTSL 2 BASIC25.47■■□□□ 1.67
SBNO1A3KN83 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC25.46■■□□□ 1.67
SBNO1A3KN83 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC25.46■■□□□ 1.67
SBNO1A3KN83 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SBNO1A3KN83 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SBNO1A3KN83 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SBNO1A3KN83 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SBNO1A3KN83 ENSA-205ENST00000361532 792 ntTSL 2 BASIC25.46■■□□□ 1.67
SBNO1A3KN83 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
SBNO1A3KN83 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
SBNO1A3KN83 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
SBNO1A3KN83 KRT18P13-201ENST00000400056 1290 ntBASIC25.46■■□□□ 1.67
SBNO1A3KN83 RPP21-221ENST00000428040 594 ntTSL 2 BASIC25.46■■□□□ 1.67
SBNO1A3KN83 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC25.46■■□□□ 1.67
SBNO1A3KN83 ELP6-205ENST00000439305 880 ntTSL 2 BASIC25.46■■□□□ 1.67
SBNO1A3KN83 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SBNO1A3KN83 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC25.46■■□□□ 1.67
SBNO1A3KN83 AC064862.7-201ENST00000604520 867 ntBASIC25.46■■□□□ 1.67
SBNO1A3KN83 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SBNO1A3KN83 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SBNO1A3KN83 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SBNO1A3KN83 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SBNO1A3KN83 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
SBNO1A3KN83 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SBNO1A3KN83 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
SBNO1A3KN83 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC25.46■■□□□ 1.67
SBNO1A3KN83 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC25.46■■□□□ 1.67
SBNO1A3KN83 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
SBNO1A3KN83 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SBNO1A3KN83 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms