Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.66■□□□□ 0.74
TCRBV5S1A1TA0A578 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TCRBV5S1A1TA0A578 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TCRBV5S1A1TA0A578 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TCRBV5S1A1TA0A578 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TCRBV5S1A1TA0A578 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TCRBV5S1A1TA0A578 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.66■□□□□ 0.74
TCRBV5S1A1TA0A578 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TCRBV5S1A1TA0A578 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TCRBV5S1A1TA0A578 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TCRBV5S1A1TA0A578 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TCRBV5S1A1TA0A578 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
TCRBV5S1A1TA0A578 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TCRBV5S1A1TA0A578 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.66■□□□□ 0.74
TCRBV5S1A1TA0A578 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TCRBV5S1A1TA0A578 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TCRBV5S1A1TA0A578 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.66■□□□□ 0.74
TCRBV5S1A1TA0A578 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.66■□□□□ 0.74
TCRBV5S1A1TA0A578 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.65■□□□□ 0.74
TCRBV5S1A1TA0A578 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TCRBV5S1A1TA0A578 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.65■□□□□ 0.74
TCRBV5S1A1TA0A578 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
TCRBV5S1A1TA0A578 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.65■□□□□ 0.74
TCRBV5S1A1TA0A578 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TCRBV5S1A1TA0A578 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TCRBV5S1A1TA0A578 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TCRBV5S1A1TA0A578 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.65■□□□□ 0.74
TCRBV5S1A1TA0A578 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.65■□□□□ 0.74
TCRBV5S1A1TA0A578 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.65■□□□□ 0.74
TCRBV5S1A1TA0A578 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.65■□□□□ 0.74
TCRBV5S1A1TA0A578 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.65■□□□□ 0.74
TCRBV5S1A1TA0A578 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TCRBV5S1A1TA0A578 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TCRBV5S1A1TA0A578 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TCRBV5S1A1TA0A578 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.64■□□□□ 0.74
TCRBV5S1A1TA0A578 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
TCRBV5S1A1TA0A578 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TCRBV5S1A1TA0A578 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TCRBV5S1A1TA0A578 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TCRBV5S1A1TA0A578 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.64■□□□□ 0.73
TCRBV5S1A1TA0A578 MIR564-202ENST00000385049 94 ntBASIC19.64■□□□□ 0.73
TCRBV5S1A1TA0A578 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
TCRBV5S1A1TA0A578 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.64■□□□□ 0.73
TCRBV5S1A1TA0A578 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.64■□□□□ 0.73
TCRBV5S1A1TA0A578 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.64■□□□□ 0.73
TCRBV5S1A1TA0A578 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.64■□□□□ 0.73
TCRBV5S1A1TA0A578 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.64■□□□□ 0.73
TCRBV5S1A1TA0A578 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
TCRBV5S1A1TA0A578 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.64■□□□□ 0.73
TCRBV5S1A1TA0A578 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.64■□□□□ 0.73
TCRBV5S1A1TA0A578 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
TCRBV5S1A1TA0A578 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.64■□□□□ 0.73
TCRBV5S1A1TA0A578 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
TCRBV5S1A1TA0A578 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TCRBV5S1A1TA0A578 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.64■□□□□ 0.73
TCRBV5S1A1TA0A578 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TCRBV5S1A1TA0A578 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TCRBV5S1A1TA0A578 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TCRBV5S1A1TA0A578 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.63■□□□□ 0.73
TCRBV5S1A1TA0A578 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
TCRBV5S1A1TA0A578 BICD1-207ENST00000551848 1962 ntBASIC19.63■□□□□ 0.73
TCRBV5S1A1TA0A578 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TCRBV5S1A1TA0A578 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TCRBV5S1A1TA0A578 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TCRBV5S1A1TA0A578 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.63■□□□□ 0.73
TCRBV5S1A1TA0A578 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TCRBV5S1A1TA0A578 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.63■□□□□ 0.73
TCRBV5S1A1TA0A578 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TCRBV5S1A1TA0A578 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TCRBV5S1A1TA0A578 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TCRBV5S1A1TA0A578 AC092338.2-201ENST00000568827 1415 ntBASIC19.63■□□□□ 0.73
TCRBV5S1A1TA0A578 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TCRBV5S1A1TA0A578 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TCRBV5S1A1TA0A578 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TCRBV5S1A1TA0A578 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TCRBV5S1A1TA0A578 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TCRBV5S1A1TA0A578 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.63■□□□□ 0.73
TCRBV5S1A1TA0A578 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.63■□□□□ 0.73
TCRBV5S1A1TA0A578 AL353719.1-201ENST00000566847 864 ntBASIC19.63■□□□□ 0.73
TCRBV5S1A1TA0A578 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.63■□□□□ 0.73
TCRBV5S1A1TA0A578 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TCRBV5S1A1TA0A578 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
TCRBV5S1A1TA0A578 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.62■□□□□ 0.73
TCRBV5S1A1TA0A578 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.62■□□□□ 0.73
TCRBV5S1A1TA0A578 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TCRBV5S1A1TA0A578 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TCRBV5S1A1TA0A578 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.62■□□□□ 0.73
TCRBV5S1A1TA0A578 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TCRBV5S1A1TA0A578 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TCRBV5S1A1TA0A578 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
TCRBV5S1A1TA0A578 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TCRBV5S1A1TA0A578 KRT8P9-201ENST00000558927 1449 ntBASIC19.62■□□□□ 0.73
TCRBV5S1A1TA0A578 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.62■□□□□ 0.73
TCRBV5S1A1TA0A578 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TCRBV5S1A1TA0A578 KRT17P2-201ENST00000300992 1314 ntBASIC19.62■□□□□ 0.73
TCRBV5S1A1TA0A578 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TCRBV5S1A1TA0A578 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
TCRBV5S1A1TA0A578 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
TCRBV5S1A1TA0A578 SLC25A1P2-201ENST00000430693 912 ntBASIC19.62■□□□□ 0.73
TCRBV5S1A1TA0A578 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms