Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
NUBP1P53384 MIR203A-201ENST00000384836 110 ntBASIC2.81□□□□□ -1.96
NUBP1P53384 MIR7-2-201ENST00000384970 110 ntBASIC2.81□□□□□ -1.96
NUBP1P53384 MIR617-201ENST00000385030 97 ntBASIC2.81□□□□□ -1.96
NUBP1P53384 RNU1-119P-201ENST00000391122 165 ntBASIC2.81□□□□□ -1.96
NUBP1P53384 RNU4-53P-201ENST00000410828 140 ntBASIC2.81□□□□□ -1.96
NUBP1P53384 HMGN2P23-201ENST00000456759 269 ntBASIC2.81□□□□□ -1.96
NUBP1P53384 RNU6-165P-201ENST00000517170 99 ntBASIC2.81□□□□□ -1.96
NUBP1P53384 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.8□□□□□ -1.96
NUBP1P53384 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.8□□□□□ -1.96
NUBP1P53384 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.8□□□□□ -1.96
NUBP1P53384 SNORD115-24-201ENST00000363528 82 ntBASIC2.8□□□□□ -1.96
NUBP1P53384 RNA5SP192-201ENST00000364404 120 ntBASIC2.8□□□□□ -1.96
NUBP1P53384 RNU6-645P-201ENST00000364649 106 ntBASIC2.8□□□□□ -1.96
NUBP1P53384 MIR30A-201ENST00000385092 71 ntBASIC2.8□□□□□ -1.96
NUBP1P53384 FO624990.1-201ENST00000636373 85 ntBASIC2.8□□□□□ -1.96
NUBP1P53384 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
NUBP1P53384 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
NUBP1P53384 RNU6-994P-201ENST00000410507 111 ntBASIC2.79□□□□□ -1.96
NUBP1P53384 HMGN1P18-201ENST00000457642 277 ntBASIC2.79□□□□□ -1.96
NUBP1P53384 SCARNA21.1-201ENST00000515996 128 ntBASIC2.79□□□□□ -1.96
NUBP1P53384 AL359821.1-201ENST00000605519 182 ntBASIC2.79□□□□□ -1.96
NUBP1P53384 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
NUBP1P53384 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
NUBP1P53384 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
NUBP1P53384 SNORD56.3-201ENST00000363507 71 ntBASIC2.78□□□□□ -1.96
NUBP1P53384 RNA5SP403-201ENST00000363598 108 ntBASIC2.78□□□□□ -1.96
NUBP1P53384 RNU1-112P-201ENST00000364401 164 ntBASIC2.78□□□□□ -1.96
NUBP1P53384 MIR764-201ENST00000390811 85 ntBASIC2.78□□□□□ -1.96
NUBP1P53384 SNORA75.2-201ENST00000391138 150 ntBASIC2.78□□□□□ -1.96
NUBP1P53384 SNORA75.3-201ENST00000391231 150 ntBASIC2.78□□□□□ -1.96
NUBP1P53384 AC067940.1-201ENST00000458411 300 ntBASIC2.78□□□□□ -1.96
NUBP1P53384 AC048334.1-201ENST00000477975 159 ntBASIC2.78□□□□□ -1.96
NUBP1P53384 Y_RNA.722-201ENST00000517279 114 ntBASIC2.78□□□□□ -1.96
NUBP1P53384 AC023827.1-201ENST00000569247 97 ntBASIC2.78□□□□□ -1.96
NUBP1P53384 MIR548O2-201ENST00000616090 70 ntBASIC2.78□□□□□ -1.96
NUBP1P53384 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.78□□□□□ -1.96
NUBP1P53384 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
NUBP1P53384 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.78□□□□□ -1.97
NUBP1P53384 RNA5SP215-201ENST00000363440 122 ntBASIC2.77□□□□□ -1.97
NUBP1P53384 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.77□□□□□ -1.97
NUBP1P53384 RN7SKP223-201ENST00000410582 62 ntBASIC2.77□□□□□ -1.97
NUBP1P53384 AL591704.2-201ENST00000421658 181 ntBASIC2.77□□□□□ -1.97
NUBP1P53384 RNA5SP282-201ENST00000516355 108 ntBASIC2.77□□□□□ -1.97
NUBP1P53384 MIR2276-201ENST00000516886 89 ntBASIC2.77□□□□□ -1.97
NUBP1P53384 AL512310.8-201ENST00000550183 120 ntBASIC2.77□□□□□ -1.97
NUBP1P53384 MIR4804-201ENST00000581683 73 ntBASIC2.77□□□□□ -1.97
NUBP1P53384 MIR5194-201ENST00000582634 120 ntBASIC2.77□□□□□ -1.97
NUBP1P53384 MIR3657-201ENST00000584818 117 ntBASIC2.77□□□□□ -1.97
NUBP1P53384 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
NUBP1P53384 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
NUBP1P53384 RNU6-260P-201ENST00000384092 107 ntBASIC2.76□□□□□ -1.97
NUBP1P53384 RNU6-808P-201ENST00000391233 108 ntBASIC2.76□□□□□ -1.97
NUBP1P53384 MIR4446-201ENST00000578505 67 ntBASIC2.76□□□□□ -1.97
NUBP1P53384 MIR548AG2-201ENST00000581228 64 ntBASIC2.76□□□□□ -1.97
NUBP1P53384 AL353997.5-201ENST00000618886 171 ntBASIC2.76□□□□□ -1.97
NUBP1P53384 MIR7111-201ENST00000619751 72 ntBASIC2.76□□□□□ -1.97
NUBP1P53384 MIR6733-201ENST00000635723 61 ntBASIC2.76□□□□□ -1.97
NUBP1P53384 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
NUBP1P53384 MIR1289-2-201ENST00000408360 111 ntBASIC2.75□□□□□ -1.97
NUBP1P53384 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
NUBP1P53384 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
NUBP1P53384 SNORA67.1-201ENST00000364749 141 ntBASIC2.74□□□□□ -1.97
NUBP1P53384 RNU7-74P-201ENST00000459104 62 ntBASIC2.74□□□□□ -1.97
NUBP1P53384 SNORA31.14-201ENST00000516728 116 ntBASIC2.74□□□□□ -1.97
NUBP1P53384 MIR4299-201ENST00000577899 72 ntBASIC2.74□□□□□ -1.97
NUBP1P53384 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.74□□□□□ -1.97
NUBP1P53384 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
NUBP1P53384 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.73□□□□□ -1.97
NUBP1P53384 SNORD114-1-201ENST00000362705 72 ntBASIC2.73□□□□□ -1.97
NUBP1P53384 RNU6-302P-201ENST00000365249 107 ntBASIC2.73□□□□□ -1.97
NUBP1P53384 RNA5SP299-201ENST00000391203 116 ntBASIC2.73□□□□□ -1.97
NUBP1P53384 RNU7-56P-201ENST00000458744 62 ntBASIC2.73□□□□□ -1.97
NUBP1P53384 MIR1273D-201ENST00000577266 86 ntBASIC2.73□□□□□ -1.97
NUBP1P53384 MIR4635-201ENST00000583759 79 ntBASIC2.73□□□□□ -1.97
NUBP1P53384 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.72□□□□□ -1.97
NUBP1P53384 MIR100-201ENST00000385259 80 ntBASIC2.72□□□□□ -1.97
NUBP1P53384 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
NUBP1P53384 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.72□□□□□ -1.97
NUBP1P53384 RNU7-104P-201ENST00000459398 79 ntBASIC2.72□□□□□ -1.97
NUBP1P53384 RNA5SP217-201ENST00000515959 91 ntBASIC2.72□□□□□ -1.97
NUBP1P53384 SNORA31.2-201ENST00000516019 134 ntBASIC2.72□□□□□ -1.97
NUBP1P53384 RN7SKP88-201ENST00000516847 250 ntBASIC2.72□□□□□ -1.97
NUBP1P53384 7SK.8-201ENST00000612110 250 ntBASIC2.72□□□□□ -1.97
NUBP1P53384 7SK.11-201ENST00000615477 250 ntBASIC2.72□□□□□ -1.97
NUBP1P53384 uc_338.16-201ENST00000621804 95 ntBASIC2.72□□□□□ -1.97
NUBP1P53384 7SK.13-201ENST00000622040 250 ntBASIC2.72□□□□□ -1.97
NUBP1P53384 AC067863.3-201ENST00000624172 122 ntBASIC2.72□□□□□ -1.97
NUBP1P53384 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.72□□□□□ -1.97
NUBP1P53384 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
NUBP1P53384 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
NUBP1P53384 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
NUBP1P53384 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.71□□□□□ -1.98
NUBP1P53384 MIR1-1-201ENST00000362147 71 ntBASIC2.71□□□□□ -1.98
NUBP1P53384 MIR26A1-201ENST00000362205 77 ntBASIC2.71□□□□□ -1.98
NUBP1P53384 Y_RNA.32-201ENST00000362589 110 ntBASIC2.71□□□□□ -1.98
NUBP1P53384 RNU7-161P-201ENST00000517289 62 ntBASIC2.71□□□□□ -1.98
NUBP1P53384 SNORA2.1-201ENST00000363089 137 ntBASIC2.7□□□□□ -1.98
NUBP1P53384 Y_RNA.226-201ENST00000364337 114 ntBASIC2.7□□□□□ -1.98
NUBP1P53384 RNU6-54P-201ENST00000365563 107 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms