Protein–RNA interactions for Protein: Q9BYQ6

KRTAP4-11, Keratin-associated protein 4-11, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-11Q9BYQ6 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
KRTAP4-11Q9BYQ6 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC1.18□□□□□ -2.22
KRTAP4-11Q9BYQ6 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
KRTAP4-11Q9BYQ6 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC1.18□□□□□ -2.22
KRTAP4-11Q9BYQ6 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC1.18□□□□□ -2.22
KRTAP4-11Q9BYQ6 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC1.18□□□□□ -2.22
KRTAP4-11Q9BYQ6 SNORA5.1-201ENST00000384275 131 ntBASIC1.18□□□□□ -2.22
KRTAP4-11Q9BYQ6 RNU1-148P-201ENST00000384472 162 ntBASIC1.18□□□□□ -2.22
KRTAP4-11Q9BYQ6 RPS29P4-201ENST00000414733 161 ntBASIC1.18□□□□□ -2.22
KRTAP4-11Q9BYQ6 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.18□□□□□ -2.22
KRTAP4-11Q9BYQ6 AC108751.2-201ENST00000469993 231 ntBASIC1.18□□□□□ -2.22
KRTAP4-11Q9BYQ6 AC025518.1-201ENST00000479856 347 ntBASIC1.18□□□□□ -2.22
KRTAP4-11Q9BYQ6 AP002795.1-201ENST00000534879 84 ntBASIC1.18□□□□□ -2.22
KRTAP4-11Q9BYQ6 MIR6500-201ENST00000622700 86 ntBASIC1.18□□□□□ -2.22
KRTAP4-11Q9BYQ6 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC1.18□□□□□ -2.22
KRTAP4-11Q9BYQ6 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC1.18□□□□□ -2.22
KRTAP4-11Q9BYQ6 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC1.18□□□□□ -2.22
KRTAP4-11Q9BYQ6 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
KRTAP4-11Q9BYQ6 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
KRTAP4-11Q9BYQ6 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
KRTAP4-11Q9BYQ6 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
KRTAP4-11Q9BYQ6 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC1.18□□□□□ -2.22
KRTAP4-11Q9BYQ6 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC1.18□□□□□ -2.22
KRTAP4-11Q9BYQ6 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC1.18□□□□□ -2.22
KRTAP4-11Q9BYQ6 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
KRTAP4-11Q9BYQ6 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
KRTAP4-11Q9BYQ6 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC1.17□□□□□ -2.22
KRTAP4-11Q9BYQ6 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
KRTAP4-11Q9BYQ6 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
KRTAP4-11Q9BYQ6 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
KRTAP4-11Q9BYQ6 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC1.17□□□□□ -2.22
KRTAP4-11Q9BYQ6 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
KRTAP4-11Q9BYQ6 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC1.17□□□□□ -2.22
KRTAP4-11Q9BYQ6 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC1.17□□□□□ -2.22
KRTAP4-11Q9BYQ6 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
KRTAP4-11Q9BYQ6 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
KRTAP4-11Q9BYQ6 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
KRTAP4-11Q9BYQ6 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
KRTAP4-11Q9BYQ6 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC1.17□□□□□ -2.22
KRTAP4-11Q9BYQ6 RNU1-18P-201ENST00000363062 164 ntBASIC1.17□□□□□ -2.22
KRTAP4-11Q9BYQ6 SNORA67.1-201ENST00000364749 141 ntBASIC1.17□□□□□ -2.22
KRTAP4-11Q9BYQ6 RN7SL517P-201ENST00000462240 305 ntBASIC1.17□□□□□ -2.22
KRTAP4-11Q9BYQ6 AC008834.1-201ENST00000511612 175 ntBASIC1.17□□□□□ -2.22
KRTAP4-11Q9BYQ6 RNU6-345P-201ENST00000517001 107 ntBASIC1.17□□□□□ -2.22
KRTAP4-11Q9BYQ6 RNU7-188P-201ENST00000517063 64 ntBASIC1.17□□□□□ -2.22
KRTAP4-11Q9BYQ6 MIR6839-201ENST00000620425 113 ntBASIC1.17□□□□□ -2.22
KRTAP4-11Q9BYQ6 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC1.17□□□□□ -2.22
KRTAP4-11Q9BYQ6 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
KRTAP4-11Q9BYQ6 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC1.17□□□□□ -2.22
KRTAP4-11Q9BYQ6 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
KRTAP4-11Q9BYQ6 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.17□□□□□ -2.22
KRTAP4-11Q9BYQ6 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC1.17□□□□□ -2.22
KRTAP4-11Q9BYQ6 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
KRTAP4-11Q9BYQ6 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
KRTAP4-11Q9BYQ6 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
KRTAP4-11Q9BYQ6 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
KRTAP4-11Q9BYQ6 SNORD18C-201ENST00000362704 69 ntBASIC1.16□□□□□ -2.22
KRTAP4-11Q9BYQ6 RNU1-93P-201ENST00000364704 169 ntBASIC1.16□□□□□ -2.22
KRTAP4-11Q9BYQ6 U8.9-201ENST00000365667 134 ntBASIC1.16□□□□□ -2.22
KRTAP4-11Q9BYQ6 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
KRTAP4-11Q9BYQ6 MIR1254-1-201ENST00000408257 97 ntBASIC1.16□□□□□ -2.22
KRTAP4-11Q9BYQ6 SNORA71B-202ENST00000439232 272 ntBASIC1.16□□□□□ -2.22
KRTAP4-11Q9BYQ6 RNU1-92P-201ENST00000517017 135 ntBASIC1.16□□□□□ -2.22
KRTAP4-11Q9BYQ6 SNORA70.25-201ENST00000612741 95 ntBASIC1.16□□□□□ -2.22
KRTAP4-11Q9BYQ6 MIR6828-201ENST00000636181 60 ntBASIC1.16□□□□□ -2.22
KRTAP4-11Q9BYQ6 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
KRTAP4-11Q9BYQ6 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC1.16□□□□□ -2.22
KRTAP4-11Q9BYQ6 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
KRTAP4-11Q9BYQ6 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
KRTAP4-11Q9BYQ6 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC1.16□□□□□ -2.22
KRTAP4-11Q9BYQ6 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC1.16□□□□□ -2.22
KRTAP4-11Q9BYQ6 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC1.16□□□□□ -2.22
KRTAP4-11Q9BYQ6 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC1.16□□□□□ -2.22
KRTAP4-11Q9BYQ6 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC1.16□□□□□ -2.22
KRTAP4-11Q9BYQ6 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
KRTAP4-11Q9BYQ6 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC1.16□□□□□ -2.22
KRTAP4-11Q9BYQ6 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
KRTAP4-11Q9BYQ6 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC1.15□□□□□ -2.22
KRTAP4-11Q9BYQ6 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.22
KRTAP4-11Q9BYQ6 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.23
KRTAP4-11Q9BYQ6 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC1.15□□□□□ -2.23
KRTAP4-11Q9BYQ6 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
KRTAP4-11Q9BYQ6 MIR30B-201ENST00000384850 88 ntBASIC1.15□□□□□ -2.23
KRTAP4-11Q9BYQ6 RNU6-127P-201ENST00000390897 107 ntBASIC1.15□□□□□ -2.23
KRTAP4-11Q9BYQ6 RNA5SP293-201ENST00000410527 113 ntBASIC1.15□□□□□ -2.23
KRTAP4-11Q9BYQ6 AC104332.2-201ENST00000429959 156 ntBASIC1.15□□□□□ -2.23
KRTAP4-11Q9BYQ6 HMGN2P23-201ENST00000456759 269 ntBASIC1.15□□□□□ -2.23
KRTAP4-11Q9BYQ6 RNU6-848P-201ENST00000515948 107 ntBASIC1.15□□□□□ -2.23
KRTAP4-11Q9BYQ6 RNU6-617P-201ENST00000516147 107 ntBASIC1.15□□□□□ -2.23
KRTAP4-11Q9BYQ6 RNU6-473P-201ENST00000516164 107 ntBASIC1.15□□□□□ -2.23
KRTAP4-11Q9BYQ6 RNA5SP227-201ENST00000516184 113 ntBASIC1.15□□□□□ -2.23
KRTAP4-11Q9BYQ6 RNA5SP519-201ENST00000516480 119 ntBASIC1.15□□□□□ -2.23
KRTAP4-11Q9BYQ6 MIR4287-201ENST00000579398 78 ntBASIC1.15□□□□□ -2.23
KRTAP4-11Q9BYQ6 MIR3922-201ENST00000585192 84 ntBASIC1.15□□□□□ -2.23
KRTAP4-11Q9BYQ6 MIR8057-201ENST00000620957 69 ntBASIC1.15□□□□□ -2.23
KRTAP4-11Q9BYQ6 MIR5683-201ENST00000636514 76 ntBASIC1.15□□□□□ -2.23
KRTAP4-11Q9BYQ6 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC1.15□□□□□ -2.23
KRTAP4-11Q9BYQ6 Z95331.1-201ENST00000623075 23112 ntBASIC1.15□□□□□ -2.23
KRTAP4-11Q9BYQ6 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
KRTAP4-11Q9BYQ6 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 198.5 ms