Protein–RNA interactions for Protein: Q6WN34

CHRDL2, Chordin-like protein 2, humanhuman

Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2Q6WN34 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
CHRDL2Q6WN34 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CHRDL2Q6WN34 SNORD1B-201ENST00000363091 84 ntBASIC3.6□□□□□ -1.83
CHRDL2Q6WN34 RNA5SP481-201ENST00000516814 122 ntBASIC3.6□□□□□ -1.83
CHRDL2Q6WN34 MIR2682-201ENST00000580305 110 ntBASIC3.6□□□□□ -1.83
CHRDL2Q6WN34 AP006437.1-201ENST00000641440 3685 ntBASIC3.6□□□□□ -1.83
CHRDL2Q6WN34 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.6□□□□□ -1.83
CHRDL2Q6WN34 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.59□□□□□ -1.83
CHRDL2Q6WN34 AC062016.1-201ENST00000355719 319 ntBASIC3.59□□□□□ -1.83
CHRDL2Q6WN34 Y_RNA.74-201ENST00000362911 99 ntBASIC3.59□□□□□ -1.83
CHRDL2Q6WN34 SNORA25.8-201ENST00000364831 128 ntBASIC3.59□□□□□ -1.83
CHRDL2Q6WN34 SNORA33.1-201ENST00000364957 130 ntBASIC3.59□□□□□ -1.83
CHRDL2Q6WN34 RNU6-220P-201ENST00000390919 107 ntBASIC3.59□□□□□ -1.83
CHRDL2Q6WN34 MIR1257-201ENST00000408490 117 ntBASIC3.59□□□□□ -1.83
CHRDL2Q6WN34 AC022018.1-201ENST00000430685 241 ntBASIC3.59□□□□□ -1.83
CHRDL2Q6WN34 RNU6-250P-201ENST00000516958 103 ntBASIC3.59□□□□□ -1.83
CHRDL2Q6WN34 AC026271.5-201ENST00000577873 130 ntBASIC3.59□□□□□ -1.83
CHRDL2Q6WN34 MIR6516-201ENST00000630554 81 ntBASIC3.59□□□□□ -1.83
CHRDL2Q6WN34 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CHRDL2Q6WN34 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CHRDL2Q6WN34 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CHRDL2Q6WN34 RNU6-535P-201ENST00000384722 107 ntBASIC3.58□□□□□ -1.84
CHRDL2Q6WN34 MIR29C-201ENST00000385231 88 ntBASIC3.58□□□□□ -1.84
CHRDL2Q6WN34 RNA5SP39-201ENST00000411245 120 ntBASIC3.58□□□□□ -1.84
CHRDL2Q6WN34 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.58□□□□□ -1.84
CHRDL2Q6WN34 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CHRDL2Q6WN34 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.58□□□□□ -1.84
CHRDL2Q6WN34 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.57□□□□□ -1.84
CHRDL2Q6WN34 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CHRDL2Q6WN34 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CHRDL2Q6WN34 MIR597-201ENST00000384968 97 ntBASIC3.57□□□□□ -1.84
CHRDL2Q6WN34 MIR519E-201ENST00000385075 84 ntBASIC3.57□□□□□ -1.84
CHRDL2Q6WN34 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.57□□□□□ -1.84
CHRDL2Q6WN34 AC105272.1-201ENST00000438604 198 ntBASIC3.57□□□□□ -1.84
CHRDL2Q6WN34 AC008413.1-201ENST00000511864 177 ntBASIC3.57□□□□□ -1.84
CHRDL2Q6WN34 AC108206.1-201ENST00000570186 4159 ntBASIC3.57□□□□□ -1.84
CHRDL2Q6WN34 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CHRDL2Q6WN34 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
CHRDL2Q6WN34 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CHRDL2Q6WN34 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.56□□□□□ -1.84
CHRDL2Q6WN34 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
CHRDL2Q6WN34 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CHRDL2Q6WN34 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.56□□□□□ -1.84
CHRDL2Q6WN34 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
CHRDL2Q6WN34 Y_RNA.282-201ENST00000364793 102 ntBASIC3.56□□□□□ -1.84
CHRDL2Q6WN34 RNU6-580P-201ENST00000365159 107 ntBASIC3.56□□□□□ -1.84
CHRDL2Q6WN34 SNORA15B-2-201ENST00000384058 135 ntBASIC3.56□□□□□ -1.84
CHRDL2Q6WN34 SNORA15B-1-201ENST00000384334 135 ntBASIC3.56□□□□□ -1.84
CHRDL2Q6WN34 RPS26P15-201ENST00000488067 348 ntBASIC3.56□□□□□ -1.84
CHRDL2Q6WN34 RNVU1-2-201ENST00000516326 135 ntBASIC3.56□□□□□ -1.84
CHRDL2Q6WN34 RNU6-579P-201ENST00000516879 102 ntBASIC3.56□□□□□ -1.84
CHRDL2Q6WN34 ZNF658B-202ENST00000615961 3375 ntBASIC3.56□□□□□ -1.84
CHRDL2Q6WN34 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CHRDL2Q6WN34 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.55□□□□□ -1.84
CHRDL2Q6WN34 SNORA71.1-201ENST00000364523 117 ntBASIC3.55□□□□□ -1.84
CHRDL2Q6WN34 RNU1-138P-201ENST00000384093 164 ntBASIC3.55□□□□□ -1.84
CHRDL2Q6WN34 RNU6-246P-201ENST00000384702 107 ntBASIC3.55□□□□□ -1.84
CHRDL2Q6WN34 MIR527-201ENST00000385244 85 ntBASIC3.55□□□□□ -1.84
CHRDL2Q6WN34 RNU7-26P-201ENST00000458980 63 ntBASIC3.55□□□□□ -1.84
CHRDL2Q6WN34 RNU6-1206P-201ENST00000516339 103 ntBASIC3.55□□□□□ -1.84
CHRDL2Q6WN34 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC3.55□□□□□ -1.84
CHRDL2Q6WN34 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CHRDL2Q6WN34 AC009487.2-201ENST00000420969 6821 ntBASIC3.55□□□□□ -1.84
CHRDL2Q6WN34 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
CHRDL2Q6WN34 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.54□□□□□ -1.84
CHRDL2Q6WN34 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CHRDL2Q6WN34 RNA5SP95-201ENST00000410319 137 ntBASIC3.54□□□□□ -1.84
CHRDL2Q6WN34 AL603825.1-201ENST00000438481 80 ntBASIC3.54□□□□□ -1.84
CHRDL2Q6WN34 AL359821.1-201ENST00000605519 182 ntBASIC3.54□□□□□ -1.84
CHRDL2Q6WN34 uc_338.32-201ENST00000615087 172 ntBASIC3.54□□□□□ -1.84
CHRDL2Q6WN34 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CHRDL2Q6WN34 RNU6-112P-201ENST00000363599 104 ntBASIC3.53□□□□□ -1.84
CHRDL2Q6WN34 AC108210.2-201ENST00000503681 201 ntBASIC3.53□□□□□ -1.84
CHRDL2Q6WN34 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.53□□□□□ -1.84
CHRDL2Q6WN34 AC012531.5-201ENST00000611375 151 ntBASIC3.53□□□□□ -1.84
CHRDL2Q6WN34 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
CHRDL2Q6WN34 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.52□□□□□ -1.85
CHRDL2Q6WN34 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.52□□□□□ -1.85
CHRDL2Q6WN34 RNU6-1123P-201ENST00000362347 106 ntBASIC3.52□□□□□ -1.85
CHRDL2Q6WN34 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC3.52□□□□□ -1.85
CHRDL2Q6WN34 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
CHRDL2Q6WN34 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
CHRDL2Q6WN34 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.51□□□□□ -1.85
CHRDL2Q6WN34 AL353746.1-201ENST00000566293 6881 ntBASIC3.51□□□□□ -1.85
CHRDL2Q6WN34 Y_RNA.633-201ENST00000459107 95 ntBASIC3.51□□□□□ -1.85
CHRDL2Q6WN34 RN7SL442P-201ENST00000473804 320 ntBASIC3.51□□□□□ -1.85
CHRDL2Q6WN34 AC020914.4-201ENST00000597690 277 ntBASIC3.51□□□□□ -1.85
CHRDL2Q6WN34 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CHRDL2Q6WN34 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.5□□□□□ -1.85
CHRDL2Q6WN34 MIR3074-201ENST00000384885 81 ntBASIC3.5□□□□□ -1.85
CHRDL2Q6WN34 RNU11-3P-201ENST00000391111 133 ntBASIC3.5□□□□□ -1.85
CHRDL2Q6WN34 snoU13.23-201ENST00000458863 104 ntBASIC3.5□□□□□ -1.85
CHRDL2Q6WN34 snoU13.15-201ENST00000459407 104 ntBASIC3.5□□□□□ -1.85
CHRDL2Q6WN34 DEFB122-202ENST00000569013 197 ntBASIC3.5□□□□□ -1.85
CHRDL2Q6WN34 AL645939.4-201ENST00000604495 135 ntBASIC3.5□□□□□ -1.85
CHRDL2Q6WN34 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CHRDL2Q6WN34 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CHRDL2Q6WN34 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
CHRDL2Q6WN34 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
CHRDL2Q6WN34 MAPK10-322ENST00000641485 4530 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 342.7 ms