RNA–Protein interactions for RNA: ENST00000516958.1

RNU6-250P-201, Transcript of RNA, U6 small nuclear 250, pseudogene, humanhuman

BASIC

Gene RNU6-250P, Length 103 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-250P-201ENST00000516958 POTEDQ86YR6 584 aa6.57□□□□□ -1.36
RNU6-250P-201ENST00000516958 AEBP2Q6ZN18 517 aaPredicted RBP5.99□□□□□ -1.45
RNU6-250P-201ENST00000516958 CHIC1Q5VXU3 224 aa5.9□□□□□ -1.46
RNU6-250P-201ENST00000516958 PHF23Q9BUL5 403 aaPredicted RBP5.23□□□□□ -1.57
RNU6-250P-201ENST00000516958 SENP3Q9H4L4 574 aaPredicted RBP5□□□□□ -1.61
RNU6-250P-201ENST00000516958 POTEHQ6S545 545 aa4.92□□□□□ -1.62
RNU6-250P-201ENST00000516958 PLPPR3Q6T4P5 718 aa4.83□□□□□ -1.64
RNU6-250P-201ENST00000516958 MSH5O43196 834 aa4.79□□□□□ -1.64
RNU6-250P-201ENST00000516958 CACNB1Q02641 598 aaPredicted RBP4.78□□□□□ -1.64
RNU6-250P-201ENST00000516958 FOXD1Q16676 465 aa4.69□□□□□ -1.66
RNU6-250P-201ENST00000516958 ADRA2BP18089 450 aa4.65□□□□□ -1.67
RNU6-250P-201ENST00000516958 PPP6R1Q9UPN7 881 aa4.6□□□□□ -1.67
RNU6-250P-201ENST00000516958 PLSCR2Q9NRY7 297 aa4.52□□□□□ -1.69
RNU6-250P-201ENST00000516958 PIAS4Q8N2W9 510 aaPredicted RBP4.49□□□□□ -1.69
RNU6-250P-201ENST00000516958 NISCHQ9Y2I1 1504 aa4.44□□□□□ -1.7
RNU6-250P-201ENST00000516958 KCNA4P22459 653 aa4.39□□□□□ -1.71
RNU6-250P-201ENST00000516958 EHMT2Q96KQ7 1210 aa4.33□□□□□ -1.72
RNU6-250P-201ENST00000516958 PPP4R3CPQ6ZMV5 832 aa4.32□□□□□ -1.72
RNU6-250P-201ENST00000516958 MAPK8IP2Q13387 824 aaPredicted RBP4.2□□□□□ -1.74
RNU6-250P-201ENST00000516958 SLC4A1APQ9BWU0 796 aaKnown RBP4.19□□□□□ -1.74
RNU6-250P-201ENST00000516958 NPM3O75607 178 aaKnown RBP4.18□□□□□ -1.74
RNU6-250P-201ENST00000516958 NCBP3Q53F19 620 aaKnown RBP4.18□□□□□ -1.74
RNU6-250P-201ENST00000516958 CNKSR2Q8WXI2 1034 aa4.12□□□□□ -1.75
RNU6-250P-201ENST00000516958 SCAF1Q9H7N4 1312 aaKnown RBP4.12□□□□□ -1.75
RNU6-250P-201ENST00000516958 SP7Q8TDD2 431 aaPredicted RBP4.09□□□□□ -1.75
RNU6-250P-201ENST00000516958 CSRNP3Q8WYN3 585 aa4.07□□□□□ -1.76
RNU6-250P-201ENST00000516958 ZBTB22O15209 634 aa4.04□□□□□ -1.76
RNU6-250P-201ENST00000516958 DCAF8L1A6NGE4 600 aa4.03□□□□□ -1.76
RNU6-250P-201ENST00000516958 DMRT2Q9Y5R5 561 aa4.01□□□□□ -1.77
RNU6-250P-201ENST00000516958 RNF39Q9H2S5 420 aa3.99□□□□□ -1.77
RNU6-250P-201ENST00000516958 RNF216Q9NWF9 866 aaPredicted RBP3.99□□□□□ -1.77
RNU6-250P-201ENST00000516958 CCDC180Q9P1Z9 1646 aa3.95□□□□□ -1.78
RNU6-250P-201ENST00000516958 FOXD4L1Q9NU39 408 aa3.95□□□□□ -1.78
RNU6-250P-201ENST00000516958 ABCC9O60706 1549 aa3.92□□□□□ -1.78
RNU6-250P-201ENST00000516958 HOXD11P31277 338 aaPredicted RBP3.92□□□□□ -1.78
RNU6-250P-201ENST00000516958 SLC4A2P04920 1241 aa3.9□□□□□ -1.79
RNU6-250P-201ENST00000516958 C1QBPQ07021 282 aaKnown RBP3.87□□□□□ -1.79
RNU6-250P-201ENST00000516958 GRWD1Q9BQ67 446 aaKnown RBP eCLIP3.87□□□□□ -1.79
RNU6-250P-201ENST00000516958 MYCNP04198 464 aaPredicted RBP3.83□□□□□ -1.8
RNU6-250P-201ENST00000516958 LHX8Q68G74 356 aa3.83□□□□□ -1.8
RNU6-250P-201ENST00000516958 ATF5Q9Y2D1 282 aaPredicted RBP3.8□□□□□ -1.8
RNU6-250P-201ENST00000516958 U3KPZ7 1027 aaPredicted RBP3.79□□□□□ -1.8
RNU6-250P-201ENST00000516958 DNAJC5BQ9UF47 199 aa3.78□□□□□ -1.8
RNU6-250P-201ENST00000516958 NACADO15069 1562 aa3.76□□□□□ -1.81
RNU6-250P-201ENST00000516958 RB1CC1Q8TDY2 1594 aa3.76□□□□□ -1.81
RNU6-250P-201ENST00000516958 MYO15BQ96JP2 1530 aa3.75□□□□□ -1.81
RNU6-250P-201ENST00000516958 FKBP8Q14318 412 aa3.75□□□□□ -1.81
RNU6-250P-201ENST00000516958 TRHP20396 242 aaPredicted RBP3.73□□□□□ -1.81
RNU6-250P-201ENST00000516958 DCAF1Q9Y4B6 1507 aa3.7□□□□□ -1.82
RNU6-250P-201ENST00000516958 CAPN15O75808 1086 aa3.7□□□□□ -1.82
RNU6-250P-201ENST00000516958 SAMD1Q6SPF0 538 aaPredicted RBP3.7□□□□□ -1.82
RNU6-250P-201ENST00000516958 SPINK5Q9NQ38 1064 aaPredicted RBP3.7□□□□□ -1.82
RNU6-250P-201ENST00000516958 ABCB7O75027 752 aa3.69□□□□□ -1.82
RNU6-250P-201ENST00000516958 ZCCHC6Q5VYS8 1495 aaKnown RBP3.68□□□□□ -1.82
RNU6-250P-201ENST00000516958 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP3.68□□□□□ -1.82
RNU6-250P-201ENST00000516958 ATXN8OSP0DMR3 200 aa3.68□□□□□ -1.82
RNU6-250P-201ENST00000516958 HNRNPUL2Q1KMD3 747 aaKnown RBP3.68□□□□□ -1.82
RNU6-250P-201ENST00000516958 PCDH10Q9P2E7 1040 aa3.68□□□□□ -1.82
RNU6-250P-201ENST00000516958 DCAF8L2P0C7V8 631 aa3.67□□□□□ -1.82
RNU6-250P-201ENST00000516958 BICRAQ9NZM4 1560 aa3.67□□□□□ -1.82
RNU6-250P-201ENST00000516958 POTEMA6NI47 508 aa3.66□□□□□ -1.82
RNU6-250P-201ENST00000516958 PABPN1Q86U42 306 aaKnown RBP eCLIP3.66□□□□□ -1.82
RNU6-250P-201ENST00000516958 ZNF219Q9P2Y4 722 aaPredicted RBP3.66□□□□□ -1.82
RNU6-250P-201ENST00000516958 SHROOM4Q9ULL8 1493 aa3.65□□□□□ -1.83
RNU6-250P-201ENST00000516958 UNC13AQ9UPW8 1703 aa3.64□□□□□ -1.83
RNU6-250P-201ENST00000516958 APLP2Q06481 763 aa3.62□□□□□ -1.83
RNU6-250P-201ENST00000516958 POLA2Q14181 598 aa3.62□□□□□ -1.83
RNU6-250P-201ENST00000516958 MKRN4PQ13434 485 aaPredicted RBP3.6□□□□□ -1.83
RNU6-250P-201ENST00000516958 POTEGQ6S5H5 508 aa3.6□□□□□ -1.83
RNU6-250P-201ENST00000516958 RTN4Q9NQC3 1192 aaKnown RBP3.6□□□□□ -1.83
RNU6-250P-201ENST00000516958 CHRDL2Q6WN34 429 aa3.59□□□□□ -1.83
RNU6-250P-201ENST00000516958 SPDYE4A6NLX3 237 aa3.58□□□□□ -1.84
RNU6-250P-201ENST00000516958 FBLN2P98095 1184 aa3.58□□□□□ -1.84
RNU6-250P-201ENST00000516958 SCRIBQ14160 1630 aa3.57□□□□□ -1.84
RNU6-250P-201ENST00000516958 EIF4G1Q04637 1599 aaKnown RBP3.56□□□□□ -1.84
RNU6-250P-201ENST00000516958 OSCARQ8IYS5 282 aa3.55□□□□□ -1.84
RNU6-250P-201ENST00000516958 CC2D2AQ9P2K1 1620 aa3.55□□□□□ -1.84
RNU6-250P-201ENST00000516958 CECR2Q9BXF3 1484 aa3.54□□□□□ -1.84
RNU6-250P-201ENST00000516958 HAX1O00165 279 aa3.52□□□□□ -1.85
RNU6-250P-201ENST00000516958 DSG3P32926 999 aa3.52□□□□□ -1.85
RNU6-250P-201ENST00000516958 AMER1Q5JTC6 1135 aaPredicted RBP3.52□□□□□ -1.85
RNU6-250P-201ENST00000516958 NCAPD3P42695 1498 aa3.49□□□□□ -1.85
RNU6-250P-201ENST00000516958 VASPP50552 380 aaPredicted RBP3.48□□□□□ -1.85
RNU6-250P-201ENST00000516958 ZNF692Q9BU19 519 aaPredicted RBP3.48□□□□□ -1.85
RNU6-250P-201ENST00000516958 ZBTB12Q9Y330 459 aaPredicted RBP3.48□□□□□ -1.85
RNU6-250P-201ENST00000516958 ATAD2BQ9ULI0 1458 aa3.47□□□□□ -1.85
RNU6-250P-201ENST00000516958 KLHL34Q8N239 644 aa3.45□□□□□ -1.86
RNU6-250P-201ENST00000516958 FBXO3Q9UK99 471 aa3.45□□□□□ -1.86
RNU6-250P-201ENST00000516958 HMGXB3Q12766 1538 aa3.44□□□□□ -1.86
RNU6-250P-201ENST00000516958 PEG3Q9GZU2 1588 aa3.44□□□□□ -1.86
RNU6-250P-201ENST00000516958 SMARCA4P51532 1647 aa3.44□□□□□ -1.86
RNU6-250P-201ENST00000516958 SMARCA2P51531 1590 aa3.43□□□□□ -1.86
RNU6-250P-201ENST00000516958 BAZ1AQ9NRL2 1556 aaPredicted RBP3.43□□□□□ -1.86
RNU6-250P-201ENST00000516958 IFNLR1Q8IU57 520 aaPredicted RBP3.43□□□□□ -1.86
RNU6-250P-201ENST00000516958 PLCD3Q8N3E9 789 aa3.43□□□□□ -1.86
RNU6-250P-201ENST00000516958 CLEC11AQ9Y240 323 aa3.42□□□□□ -1.86
RNU6-250P-201ENST00000516958 MROH2BQ7Z745 1585 aa3.42□□□□□ -1.86
RNU6-250P-201ENST00000516958 SLC24A1O60721 1099 aa3.41□□□□□ -1.86
RNU6-250P-201ENST00000516958 PROM2Q8N271 834 aa3.41□□□□□ -1.86
RNU6-250P-201ENST00000516958 CUX2O14529 1486 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms