Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 RNU6-1053P-201ENST00000515930 101 ntBASIC2.27□□□□□ -2.05
RNF43Q68DV7 MIR3134-201ENST00000579433 74 ntBASIC2.27□□□□□ -2.05
RNF43Q68DV7 MIR4500-201ENST00000579472 76 ntBASIC2.27□□□□□ -2.05
RNF43Q68DV7 MIR5694-201ENST00000581190 76 ntBASIC2.27□□□□□ -2.05
RNF43Q68DV7 MIR4658-201ENST00000584344 65 ntBASIC2.27□□□□□ -2.05
RNF43Q68DV7 AL662814.1-201ENST00000617364 121 ntBASIC2.27□□□□□ -2.05
RNF43Q68DV7 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.27□□□□□ -2.05
RNF43Q68DV7 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
RNF43Q68DV7 SNORA63.2-201ENST00000362603 126 ntBASIC2.26□□□□□ -2.05
RNF43Q68DV7 SNORA67.1-201ENST00000364749 141 ntBASIC2.26□□□□□ -2.05
RNF43Q68DV7 RNU6-686P-201ENST00000364839 107 ntBASIC2.26□□□□□ -2.05
RNF43Q68DV7 SNORA48.3-201ENST00000391081 134 ntBASIC2.26□□□□□ -2.05
RNF43Q68DV7 MIR1287-201ENST00000408492 90 ntBASIC2.26□□□□□ -2.05
RNF43Q68DV7 RNU6-717P-201ENST00000459076 104 ntBASIC2.26□□□□□ -2.05
RNF43Q68DV7 RNU7-41P-201ENST00000515917 61 ntBASIC2.26□□□□□ -2.05
RNF43Q68DV7 RNU6-557P-201ENST00000516842 110 ntBASIC2.26□□□□□ -2.05
RNF43Q68DV7 RNU6-850P-201ENST00000516934 103 ntBASIC2.26□□□□□ -2.05
RNF43Q68DV7 MIR4796-201ENST00000580742 81 ntBASIC2.26□□□□□ -2.05
RNF43Q68DV7 MIR3935-201ENST00000583472 104 ntBASIC2.26□□□□□ -2.05
RNF43Q68DV7 MIR219B-201ENST00000637023 88 ntBASIC2.26□□□□□ -2.05
RNF43Q68DV7 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.26□□□□□ -2.05
RNF43Q68DV7 RNU6-949P-201ENST00000384040 107 ntBASIC2.25□□□□□ -2.05
RNF43Q68DV7 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
RNF43Q68DV7 AC138749.4-201ENST00000563970 127 ntBASIC2.25□□□□□ -2.05
RNF43Q68DV7 RNU6-161P-201ENST00000363051 106 ntBASIC2.24□□□□□ -2.05
RNF43Q68DV7 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
RNF43Q68DV7 SNORA26.9-201ENST00000391322 122 ntBASIC2.24□□□□□ -2.05
RNF43Q68DV7 HMGN2P39-201ENST00000398005 273 ntBASIC2.24□□□□□ -2.05
RNF43Q68DV7 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.24□□□□□ -2.05
RNF43Q68DV7 RNA5SP338-201ENST00000410495 85 ntBASIC2.24□□□□□ -2.05
RNF43Q68DV7 Y_RNA.648-201ENST00000459455 110 ntBASIC2.24□□□□□ -2.05
RNF43Q68DV7 AC023790.1-201ENST00000482174 347 ntBASIC2.24□□□□□ -2.05
RNF43Q68DV7 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.24□□□□□ -2.05
RNF43Q68DV7 SNORA67.3-201ENST00000384366 140 ntBASIC2.23□□□□□ -2.05
RNF43Q68DV7 AC244023.1-201ENST00000426884 112 ntBASIC2.23□□□□□ -2.05
RNF43Q68DV7 AC009474.2-201ENST00000451383 136 ntBASIC2.23□□□□□ -2.05
RNF43Q68DV7 RNU6-1108P-201ENST00000516308 104 ntBASIC2.23□□□□□ -2.05
RNF43Q68DV7 MIR4498-201ENST00000577599 66 ntBASIC2.23□□□□□ -2.05
RNF43Q68DV7 MIR5002-201ENST00000584713 97 ntBASIC2.23□□□□□ -2.05
RNF43Q68DV7 AC242498.1-201ENST00000604134 111 ntBASIC2.23□□□□□ -2.05
RNF43Q68DV7 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.23□□□□□ -2.05
RNF43Q68DV7 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
RNF43Q68DV7 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
RNF43Q68DV7 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
RNF43Q68DV7 RNU1-52P-201ENST00000384190 164 ntBASIC2.22□□□□□ -2.05
RNF43Q68DV7 RNA5SP292-201ENST00000390974 118 ntBASIC2.22□□□□□ -2.05
RNF43Q68DV7 RNU6-380P-201ENST00000410207 107 ntBASIC2.22□□□□□ -2.05
RNF43Q68DV7 HMGN2P38-201ENST00000423806 265 ntBASIC2.22□□□□□ -2.05
RNF43Q68DV7 BX276092.1-201ENST00000427368 251 ntBASIC2.22□□□□□ -2.05
RNF43Q68DV7 AC005908.1-201ENST00000468701 347 ntBASIC2.22□□□□□ -2.05
RNF43Q68DV7 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.22□□□□□ -2.05
RNF43Q68DV7 MIR4781-201ENST00000585250 76 ntBASIC2.22□□□□□ -2.05
RNF43Q68DV7 U6.109-201ENST00000636749 87 ntBASIC2.22□□□□□ -2.05
RNF43Q68DV7 RNU1-17P-201ENST00000363022 152 ntBASIC2.21□□□□□ -2.06
RNF43Q68DV7 RNU6-203P-201ENST00000384038 104 ntBASIC2.21□□□□□ -2.06
RNF43Q68DV7 RNU4-52P-201ENST00000384209 138 ntBASIC2.21□□□□□ -2.06
RNF43Q68DV7 RNU6-411P-201ENST00000384451 107 ntBASIC2.21□□□□□ -2.06
RNF43Q68DV7 MIR524-201ENST00000385242 87 ntBASIC2.21□□□□□ -2.06
RNF43Q68DV7 U8.13-201ENST00000390842 128 ntBASIC2.21□□□□□ -2.06
RNF43Q68DV7 snoU13.2-201ENST00000459201 104 ntBASIC2.21□□□□□ -2.06
RNF43Q68DV7 RNU6-539P-201ENST00000516665 103 ntBASIC2.21□□□□□ -2.06
RNF43Q68DV7 AL161722.3-201ENST00000605789 2983 ntBASIC2.21□□□□□ -2.06
RNF43Q68DV7 WWP1P1-201ENST00000466609 2769 ntBASIC2.21□□□□□ -2.06
RNF43Q68DV7 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
RNF43Q68DV7 AC008163.1-202ENST00000636004 2889 ntBASIC2.2□□□□□ -2.06
RNF43Q68DV7 RNU6-811P-201ENST00000384069 107 ntBASIC2.2□□□□□ -2.06
RNF43Q68DV7 RNA5SP100-201ENST00000410903 110 ntBASIC2.2□□□□□ -2.06
RNF43Q68DV7 RNA5SP59-201ENST00000410922 110 ntBASIC2.2□□□□□ -2.06
RNF43Q68DV7 AC025033.1-201ENST00000463883 194 ntBASIC2.2□□□□□ -2.06
RNF43Q68DV7 SNORA18.5-201ENST00000516616 101 ntBASIC2.2□□□□□ -2.06
RNF43Q68DV7 RNU1-40P-201ENST00000516816 164 ntBASIC2.2□□□□□ -2.06
RNF43Q68DV7 RNU1-97P-201ENST00000516872 164 ntBASIC2.2□□□□□ -2.06
RNF43Q68DV7 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.2□□□□□ -2.06
RNF43Q68DV7 MIR4536-1-201ENST00000583537 88 ntBASIC2.2□□□□□ -2.06
RNF43Q68DV7 PRELID3BP2-201ENST00000605362 201 ntBASIC2.2□□□□□ -2.06
RNF43Q68DV7 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.2□□□□□ -2.06
RNF43Q68DV7 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.2□□□□□ -2.06
RNF43Q68DV7 MIR6132-201ENST00000622083 109 ntBASIC2.2□□□□□ -2.06
RNF43Q68DV7 RNU6-1123P-201ENST00000362347 106 ntBASIC2.19□□□□□ -2.06
RNF43Q68DV7 Y_RNA.118-201ENST00000363300 101 ntBASIC2.19□□□□□ -2.06
RNF43Q68DV7 Y_RNA.119-201ENST00000363301 96 ntBASIC2.19□□□□□ -2.06
RNF43Q68DV7 RNU6-571P-201ENST00000384128 107 ntBASIC2.19□□□□□ -2.06
RNF43Q68DV7 SNORA72.6-201ENST00000384520 129 ntBASIC2.19□□□□□ -2.06
RNF43Q68DV7 Y_RNA.532-201ENST00000384590 113 ntBASIC2.19□□□□□ -2.06
RNF43Q68DV7 MIR588-201ENST00000384900 83 ntBASIC2.19□□□□□ -2.06
RNF43Q68DV7 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
RNF43Q68DV7 SNORA40.18-201ENST00000391200 128 ntBASIC2.19□□□□□ -2.06
RNF43Q68DV7 RNU6-1015P-201ENST00000517121 99 ntBASIC2.19□□□□□ -2.06
RNF43Q68DV7 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2.19□□□□□ -2.06
RNF43Q68DV7 MIR4484-201ENST00000582855 83 ntBASIC2.19□□□□□ -2.06
RNF43Q68DV7 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
RNF43Q68DV7 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
RNF43Q68DV7 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
RNF43Q68DV7 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
RNF43Q68DV7 MIR653-201ENST00000385279 96 ntBASIC2.18□□□□□ -2.06
RNF43Q68DV7 HSPE1P24-201ENST00000450782 238 ntBASIC2.18□□□□□ -2.06
RNF43Q68DV7 FGF7P7-201ENST00000514120 227 ntBASIC2.18□□□□□ -2.06
RNF43Q68DV7 Y_RNA.660-201ENST00000516002 120 ntBASIC2.18□□□□□ -2.06
RNF43Q68DV7 SNORA31.17-201ENST00000516953 127 ntBASIC2.18□□□□□ -2.06
RNF43Q68DV7 MIR4448-201ENST00000584360 86 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms