Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HOXD11P31277 SNORD113.3-201ENST00000364630 78 ntBASIC3.87□□□□□ -1.79
HOXD11P31277 RNU7-104P-201ENST00000459398 79 ntBASIC3.87□□□□□ -1.79
HOXD11P31277 RNU1-41P-201ENST00000516161 162 ntBASIC3.87□□□□□ -1.79
HOXD11P31277 RNA5SP341-201ENST00000516261 117 ntBASIC3.87□□□□□ -1.79
HOXD11P31277 RNU1-48P-201ENST00000516400 162 ntBASIC3.87□□□□□ -1.79
HOXD11P31277 SNORA31.11-201ENST00000516528 139 ntBASIC3.87□□□□□ -1.79
HOXD11P31277 MIR4425-201ENST00000580572 84 ntBASIC3.87□□□□□ -1.79
HOXD11P31277 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.87□□□□□ -1.79
HOXD11P31277 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HOXD11P31277 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HOXD11P31277 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HOXD11P31277 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HOXD11P31277 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXD11P31277 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXD11P31277 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.86□□□□□ -1.79
HOXD11P31277 SNORD114-4-201ENST00000363962 75 ntBASIC3.85□□□□□ -1.79
HOXD11P31277 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.85□□□□□ -1.79
HOXD11P31277 AC006011.1-201ENST00000442758 349 ntBASIC3.85□□□□□ -1.79
HOXD11P31277 snoU13.13-201ENST00000458842 104 ntBASIC3.85□□□□□ -1.79
HOXD11P31277 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.85□□□□□ -1.79
HOXD11P31277 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
HOXD11P31277 RNU1-15P-201ENST00000353977 144 ntBASIC3.84□□□□□ -1.79
HOXD11P31277 SNORA40.16-201ENST00000517238 121 ntBASIC3.84□□□□□ -1.79
HOXD11P31277 MIR4635-201ENST00000583759 79 ntBASIC3.84□□□□□ -1.79
HOXD11P31277 MIR5684-201ENST00000585074 65 ntBASIC3.84□□□□□ -1.79
HOXD11P31277 MIR7110-201ENST00000612638 86 ntBASIC3.84□□□□□ -1.79
HOXD11P31277 AC027335.2-201ENST00000624030 375 ntBASIC3.84□□□□□ -1.79
HOXD11P31277 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HOXD11P31277 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
HOXD11P31277 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
HOXD11P31277 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
HOXD11P31277 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HOXD11P31277 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.83□□□□□ -1.8
HOXD11P31277 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.83□□□□□ -1.8
HOXD11P31277 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
HOXD11P31277 MIR422A-201ENST00000362286 90 ntBASIC3.83□□□□□ -1.8
HOXD11P31277 Y_RNA.246-201ENST00000364495 108 ntBASIC3.83□□□□□ -1.8
HOXD11P31277 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
HOXD11P31277 MIR938-201ENST00000401216 83 ntBASIC3.83□□□□□ -1.8
HOXD11P31277 RNU7-74P-201ENST00000459104 62 ntBASIC3.83□□□□□ -1.8
HOXD11P31277 RNA5SP179-201ENST00000517284 121 ntBASIC3.83□□□□□ -1.8
HOXD11P31277 MIR4676-201ENST00000583078 72 ntBASIC3.83□□□□□ -1.8
HOXD11P31277 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
HOXD11P31277 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
HOXD11P31277 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HOXD11P31277 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HOXD11P31277 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
HOXD11P31277 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HOXD11P31277 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.82□□□□□ -1.8
HOXD11P31277 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
HOXD11P31277 Y_RNA.224-201ENST00000364308 111 ntBASIC3.82□□□□□ -1.8
HOXD11P31277 Y_RNA.226-201ENST00000364337 114 ntBASIC3.82□□□□□ -1.8
HOXD11P31277 RNU7-161P-201ENST00000517289 62 ntBASIC3.82□□□□□ -1.8
HOXD11P31277 MIR486-1-201ENST00000612171 68 ntBASIC3.82□□□□□ -1.8
HOXD11P31277 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.82□□□□□ -1.8
HOXD11P31277 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HOXD11P31277 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
HOXD11P31277 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
HOXD11P31277 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.81□□□□□ -1.8
HOXD11P31277 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
HOXD11P31277 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
HOXD11P31277 RNU6-1250P-201ENST00000391218 107 ntBASIC3.81□□□□□ -1.8
HOXD11P31277 snoU13.26-201ENST00000459452 105 ntBASIC3.81□□□□□ -1.8
HOXD11P31277 MIR3664-201ENST00000579074 99 ntBASIC3.81□□□□□ -1.8
HOXD11P31277 MIR5004-201ENST00000579078 107 ntBASIC3.81□□□□□ -1.8
HOXD11P31277 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HOXD11P31277 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
HOXD11P31277 Y_RNA.118-201ENST00000363300 101 ntBASIC3.8□□□□□ -1.8
HOXD11P31277 RPS26P5-201ENST00000418544 335 ntBASIC3.8□□□□□ -1.8
HOXD11P31277 AC067863.3-201ENST00000624172 122 ntBASIC3.8□□□□□ -1.8
HOXD11P31277 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HOXD11P31277 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.8□□□□□ -1.8
HOXD11P31277 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
HOXD11P31277 SNORA15B-2-201ENST00000384058 135 ntBASIC3.79□□□□□ -1.8
HOXD11P31277 SNORA15B-1-201ENST00000384334 135 ntBASIC3.79□□□□□ -1.8
HOXD11P31277 MIR1911-201ENST00000410783 80 ntBASIC3.79□□□□□ -1.8
HOXD11P31277 AC083863.1-201ENST00000438811 231 ntBASIC3.79□□□□□ -1.8
HOXD11P31277 RNU7-102P-201ENST00000458948 62 ntBASIC3.79□□□□□ -1.8
HOXD11P31277 MIR5680-201ENST00000577577 84 ntBASIC3.79□□□□□ -1.8
HOXD11P31277 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HOXD11P31277 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HOXD11P31277 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.78□□□□□ -1.8
HOXD11P31277 RNU6-247P-201ENST00000362636 107 ntBASIC3.78□□□□□ -1.8
HOXD11P31277 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
HOXD11P31277 RNA5SP450-201ENST00000411206 102 ntBASIC3.78□□□□□ -1.8
HOXD11P31277 AC108210.2-201ENST00000503681 201 ntBASIC3.78□□□□□ -1.8
HOXD11P31277 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HOXD11P31277 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
HOXD11P31277 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
HOXD11P31277 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HOXD11P31277 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.78□□□□□ -1.81
HOXD11P31277 Y_RNA.325-201ENST00000365171 122 ntBASIC3.77□□□□□ -1.81
HOXD11P31277 SNORA44-201ENST00000384584 132 ntBASIC3.77□□□□□ -1.81
HOXD11P31277 Z96811.1-201ENST00000445880 108 ntBASIC3.77□□□□□ -1.81
HOXD11P31277 MIR432-201ENST00000606207 94 ntBASIC3.77□□□□□ -1.81
HOXD11P31277 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
HOXD11P31277 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
HOXD11P31277 Y_RNA.174-201ENST00000363781 105 ntBASIC3.76□□□□□ -1.81
HOXD11P31277 SNORD66.1-201ENST00000391230 76 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 417.8 ms