Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 U6.98-201ENST00000637157 84 ntBASIC3.99□□□□□ -1.77
HOXD11P31277 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HOXD11P31277 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.99□□□□□ -1.77
HOXD11P31277 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HOXD11P31277 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HOXD11P31277 MIR504-201ENST00000385065 83 ntBASIC3.98□□□□□ -1.77
HOXD11P31277 SNORD116.2-201ENST00000391251 93 ntBASIC3.98□□□□□ -1.77
HOXD11P31277 MIR887-201ENST00000401258 79 ntBASIC3.98□□□□□ -1.77
HOXD11P31277 RNU6-994P-201ENST00000410507 111 ntBASIC3.98□□□□□ -1.77
HOXD11P31277 RPS29P19-201ENST00000479709 171 ntBASIC3.98□□□□□ -1.77
HOXD11P31277 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.98□□□□□ -1.77
HOXD11P31277 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
HOXD11P31277 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
HOXD11P31277 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
HOXD11P31277 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HOXD11P31277 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
HOXD11P31277 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
HOXD11P31277 RNA5SP151-201ENST00000365632 117 ntBASIC3.97□□□□□ -1.77
HOXD11P31277 RNU1-63P-201ENST00000383902 164 ntBASIC3.97□□□□□ -1.77
HOXD11P31277 RNU6-364P-201ENST00000384387 107 ntBASIC3.97□□□□□ -1.77
HOXD11P31277 SNORA40.17-201ENST00000517256 115 ntBASIC3.97□□□□□ -1.77
HOXD11P31277 AC019176.1-201ENST00000518519 225 ntBASIC3.97□□□□□ -1.77
HOXD11P31277 MIR5047-201ENST00000579212 100 ntBASIC3.97□□□□□ -1.77
HOXD11P31277 AL033523.1-201ENST00000605153 153 ntBASIC3.97□□□□□ -1.77
HOXD11P31277 U4.4-201ENST00000620626 117 ntBASIC3.97□□□□□ -1.77
HOXD11P31277 GS1-279B7.1-204ENST00000641809 378 ntBASIC3.97□□□□□ -1.77
HOXD11P31277 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.97□□□□□ -1.77
HOXD11P31277 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
HOXD11P31277 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.96□□□□□ -1.78
HOXD11P31277 SNORA31.26-201ENST00000517250 137 ntBASIC3.96□□□□□ -1.78
HOXD11P31277 MIR548X-201ENST00000580069 75 ntBASIC3.96□□□□□ -1.78
HOXD11P31277 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
HOXD11P31277 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.96□□□□□ -1.78
HOXD11P31277 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HOXD11P31277 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXD11P31277 RNU6-838P-201ENST00000363399 108 ntBASIC3.95□□□□□ -1.78
HOXD11P31277 AL603825.1-201ENST00000438481 80 ntBASIC3.95□□□□□ -1.78
HOXD11P31277 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXD11P31277 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.95□□□□□ -1.78
HOXD11P31277 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXD11P31277 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.94□□□□□ -1.78
HOXD11P31277 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3.94□□□□□ -1.78
HOXD11P31277 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.94□□□□□ -1.78
HOXD11P31277 RNA5SP374-201ENST00000362939 125 ntBASIC3.94□□□□□ -1.78
HOXD11P31277 MIR3162-201ENST00000581818 82 ntBASIC3.94□□□□□ -1.78
HOXD11P31277 MIR6868-201ENST00000611215 58 ntBASIC3.94□□□□□ -1.78
HOXD11P31277 MIR7112-201ENST00000616126 65 ntBASIC3.94□□□□□ -1.78
HOXD11P31277 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
HOXD11P31277 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HOXD11P31277 SNORD115-24-201ENST00000363528 82 ntBASIC3.93□□□□□ -1.78
HOXD11P31277 AL161935.2-201ENST00000414627 60 ntBASIC3.93□□□□□ -1.78
HOXD11P31277 RNU2-27P-201ENST00000516185 142 ntBASIC3.93□□□□□ -1.78
HOXD11P31277 AC008011.1-201ENST00000545989 227 ntBASIC3.93□□□□□ -1.78
HOXD11P31277 CYP4A43P-201ENST00000568156 121 ntBASIC3.93□□□□□ -1.78
HOXD11P31277 MIR5187-201ENST00000583479 76 ntBASIC3.93□□□□□ -1.78
HOXD11P31277 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
HOXD11P31277 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HOXD11P31277 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HOXD11P31277 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.92□□□□□ -1.78
HOXD11P31277 MIR519E-201ENST00000385075 84 ntBASIC3.92□□□□□ -1.78
HOXD11P31277 RNU6-724P-201ENST00000390958 105 ntBASIC3.92□□□□□ -1.78
HOXD11P31277 RNU6-250P-201ENST00000516958 103 ntBASIC3.92□□□□□ -1.78
HOXD11P31277 U2.7-201ENST00000619197 100 ntBASIC3.92□□□□□ -1.78
HOXD11P31277 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
HOXD11P31277 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.92□□□□□ -1.78
HOXD11P31277 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
HOXD11P31277 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HOXD11P31277 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
HOXD11P31277 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HOXD11P31277 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
HOXD11P31277 RN7SKP123-201ENST00000410732 291 ntBASIC3.91□□□□□ -1.78
HOXD11P31277 JTBP1-201ENST00000441314 247 ntBASIC3.91□□□□□ -1.78
HOXD11P31277 MIR4435-1-201ENST00000582552 80 ntBASIC3.91□□□□□ -1.78
HOXD11P31277 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.91□□□□□ -1.78
HOXD11P31277 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HOXD11P31277 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.91□□□□□ -1.78
HOXD11P31277 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HOXD11P31277 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
HOXD11P31277 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HOXD11P31277 SNORA74C-2-201ENST00000411179 201 ntBASIC3.9□□□□□ -1.79
HOXD11P31277 SNORD105B-201ENST00000458770 79 ntBASIC3.9□□□□□ -1.79
HOXD11P31277 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HOXD11P31277 AL359851.1-201ENST00000569460 4997 ntBASIC3.9□□□□□ -1.79
HOXD11P31277 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.89□□□□□ -1.79
HOXD11P31277 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
HOXD11P31277 RNA5SP403-201ENST00000363598 108 ntBASIC3.89□□□□□ -1.79
HOXD11P31277 AC006064.5-201ENST00000541782 248 ntBASIC3.89□□□□□ -1.79
HOXD11P31277 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.89□□□□□ -1.79
HOXD11P31277 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HOXD11P31277 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HOXD11P31277 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.89□□□□□ -1.79
HOXD11P31277 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.89□□□□□ -1.79
HOXD11P31277 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.88□□□□□ -1.79
HOXD11P31277 SNORA41B-201ENST00000384785 128 ntBASIC3.88□□□□□ -1.79
HOXD11P31277 RNA5SP270-201ENST00000411361 118 ntBASIC3.88□□□□□ -1.79
HOXD11P31277 CYCSP4-201ENST00000429682 331 ntBASIC3.88□□□□□ -1.79
HOXD11P31277 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HOXD11P31277 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
HOXD11P31277 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
HOXD11P31277 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 245.3 ms