Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 AC009474.2-201ENST00000451383 136 ntBASIC2.16□□□□□ -2.06
PAX4O43316 RN7SL75P-201ENST00000461926 281 ntBASIC2.16□□□□□ -2.06
PAX4O43316 RN7SL499P-201ENST00000481141 276 ntBASIC2.16□□□□□ -2.06
PAX4O43316 MIR5004-201ENST00000579078 107 ntBASIC2.16□□□□□ -2.06
PAX4O43316 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.16□□□□□ -2.06
PAX4O43316 MTRNR2L2-201ENST00000604882 87 ntBASIC2.16□□□□□ -2.06
PAX4O43316 PRELID3BP2-201ENST00000605362 201 ntBASIC2.16□□□□□ -2.06
PAX4O43316 AC022202.1-201ENST00000613515 211 ntBASIC2.16□□□□□ -2.06
PAX4O43316 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.16□□□□□ -2.06
PAX4O43316 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
PAX4O43316 Z82195.2-201ENST00000612348 18351 ntBASIC2.16□□□□□ -2.06
PAX4O43316 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
PAX4O43316 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
PAX4O43316 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
PAX4O43316 MIR22-201ENST00000362190 85 ntBASIC2.15□□□□□ -2.07
PAX4O43316 SNORA71.1-201ENST00000364523 117 ntBASIC2.15□□□□□ -2.07
PAX4O43316 RNU6-1177P-201ENST00000391058 104 ntBASIC2.15□□□□□ -2.07
PAX4O43316 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.15□□□□□ -2.07
PAX4O43316 RNU6-1054P-201ENST00000411293 104 ntBASIC2.15□□□□□ -2.07
PAX4O43316 CYP2C59P-201ENST00000457790 269 ntBASIC2.15□□□□□ -2.07
PAX4O43316 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
PAX4O43316 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
PAX4O43316 MIR561-201ENST00000385216 97 ntBASIC2.14□□□□□ -2.07
PAX4O43316 MIR548F3-201ENST00000408509 87 ntBASIC2.14□□□□□ -2.07
PAX4O43316 SNORD100-201ENST00000408573 76 ntBASIC2.14□□□□□ -2.07
PAX4O43316 RN7SL633P-201ENST00000488974 297 ntBASIC2.14□□□□□ -2.07
PAX4O43316 SNORA9.3-201ENST00000516383 129 ntBASIC2.14□□□□□ -2.07
PAX4O43316 RNA5SP437-201ENST00000517249 129 ntBASIC2.14□□□□□ -2.07
PAX4O43316 AC107016.2-201ENST00000547968 190 ntBASIC2.14□□□□□ -2.07
PAX4O43316 SUB1P4-201ENST00000566062 339 ntBASIC2.14□□□□□ -2.07
PAX4O43316 MIR4491-201ENST00000581087 68 ntBASIC2.14□□□□□ -2.07
PAX4O43316 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.14□□□□□ -2.07
PAX4O43316 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.14□□□□□ -2.07
PAX4O43316 MIR4251-201ENST00000635819 61 ntBASIC2.14□□□□□ -2.07
PAX4O43316 ZNF355P-201ENST00000427301 3216 ntBASIC2.14□□□□□ -2.07
PAX4O43316 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
PAX4O43316 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
PAX4O43316 SNORD21-201ENST00000383953 95 ntBASIC2.13□□□□□ -2.07
PAX4O43316 Y_RNA.536-201ENST00000384621 113 ntBASIC2.13□□□□□ -2.07
PAX4O43316 Y_RNA.588-201ENST00000391254 102 ntBASIC2.13□□□□□ -2.07
PAX4O43316 HMGN2P35-201ENST00000412164 270 ntBASIC2.13□□□□□ -2.07
PAX4O43316 MTND4LP1-201ENST00000446263 157 ntBASIC2.13□□□□□ -2.07
PAX4O43316 RNU6-274P-201ENST00000459566 107 ntBASIC2.13□□□□□ -2.07
PAX4O43316 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.13□□□□□ -2.07
PAX4O43316 EIF4BP1-201ENST00000554881 351 ntBASIC2.13□□□□□ -2.07
PAX4O43316 SNORA4-201ENST00000584302 138 ntBASIC2.13□□□□□ -2.07
PAX4O43316 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
PAX4O43316 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
PAX4O43316 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.13□□□□□ -2.07
PAX4O43316 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.12□□□□□ -2.07
PAX4O43316 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
PAX4O43316 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
PAX4O43316 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
PAX4O43316 MIR422A-201ENST00000362286 90 ntBASIC2.12□□□□□ -2.07
PAX4O43316 RNU6-645P-201ENST00000364649 106 ntBASIC2.12□□□□□ -2.07
PAX4O43316 RNU6-1335P-201ENST00000365426 107 ntBASIC2.12□□□□□ -2.07
PAX4O43316 MIR520C-201ENST00000385005 87 ntBASIC2.12□□□□□ -2.07
PAX4O43316 MIR1302-7-201ENST00000408841 72 ntBASIC2.12□□□□□ -2.07
PAX4O43316 RN7SL20P-201ENST00000488827 297 ntBASIC2.12□□□□□ -2.07
PAX4O43316 AC023141.11-201ENST00000508864 202 ntBASIC2.12□□□□□ -2.07
PAX4O43316 SNORA70.24-201ENST00000517233 118 ntBASIC2.12□□□□□ -2.07
PAX4O43316 MIR7157-201ENST00000635801 60 ntBASIC2.12□□□□□ -2.07
PAX4O43316 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
PAX4O43316 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
PAX4O43316 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
PAX4O43316 RNA5SP374-201ENST00000362939 125 ntBASIC2.11□□□□□ -2.07
PAX4O43316 SNORA16B-201ENST00000364674 135 ntBASIC2.11□□□□□ -2.07
PAX4O43316 RNU6-220P-201ENST00000390919 107 ntBASIC2.11□□□□□ -2.07
PAX4O43316 RNU6-930P-201ENST00000390938 100 ntBASIC2.11□□□□□ -2.07
PAX4O43316 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.11□□□□□ -2.07
PAX4O43316 AL023284.1-201ENST00000403956 276 ntBASIC2.11□□□□□ -2.07
PAX4O43316 AC008885.1-201ENST00000514930 301 ntBASIC2.11□□□□□ -2.07
PAX4O43316 Y_RNA.809-201ENST00000516058 95 ntBASIC2.11□□□□□ -2.07
PAX4O43316 RNU7-43P-201ENST00000516554 64 ntBASIC2.11□□□□□ -2.07
PAX4O43316 NAMPTP3-201ENST00000569273 224 ntBASIC2.11□□□□□ -2.07
PAX4O43316 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.11□□□□□ -2.07
PAX4O43316 AP000942.3-201ENST00000603702 160 ntBASIC2.11□□□□□ -2.07
PAX4O43316 AL078603.1-201ENST00000603824 313 ntBASIC2.11□□□□□ -2.07
PAX4O43316 RNU6-92P-201ENST00000605893 104 ntBASIC2.11□□□□□ -2.07
PAX4O43316 MIR3651-201ENST00000630427 90 ntBASIC2.11□□□□□ -2.07
PAX4O43316 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
PAX4O43316 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.11□□□□□ -2.07
PAX4O43316 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
PAX4O43316 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.11□□□□□ -2.07
PAX4O43316 VTRNA1-1-201ENST00000363120 99 ntBASIC2.1□□□□□ -2.07
PAX4O43316 MIR545-201ENST00000385085 106 ntBASIC2.1□□□□□ -2.07
PAX4O43316 SNORA11.4-201ENST00000408823 129 ntBASIC2.1□□□□□ -2.07
PAX4O43316 RNU6-935P-201ENST00000410371 100 ntBASIC2.1□□□□□ -2.07
PAX4O43316 BX510359.4-201ENST00000423750 193 ntBASIC2.1□□□□□ -2.07
PAX4O43316 SNORA40.17-201ENST00000517256 115 ntBASIC2.1□□□□□ -2.07
PAX4O43316 AC015688.6-201ENST00000577737 104 ntBASIC2.1□□□□□ -2.07
PAX4O43316 MIR3935-201ENST00000583472 104 ntBASIC2.1□□□□□ -2.07
PAX4O43316 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.1□□□□□ -2.07
PAX4O43316 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
PAX4O43316 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.09□□□□□ -2.07
PAX4O43316 RNU6-1260P-201ENST00000362944 107 ntBASIC2.09□□□□□ -2.07
PAX4O43316 Y_RNA.333-201ENST00000365274 102 ntBASIC2.09□□□□□ -2.07
PAX4O43316 MIR597-201ENST00000384968 97 ntBASIC2.09□□□□□ -2.07
PAX4O43316 MIR627-201ENST00000384979 97 ntBASIC2.09□□□□□ -2.07
PAX4O43316 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 269.9 ms