Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 NTF6B-201ENST00000591913 560 ntBASIC17.41■□□□□ 0.38
HRH3Q9Y5N1 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
HRH3Q9Y5N1 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
HRH3Q9Y5N1 FAM87A-204ENST00000613235 858 ntBASIC17.41■□□□□ 0.38
HRH3Q9Y5N1 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.41■□□□□ 0.38
HRH3Q9Y5N1 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HRH3Q9Y5N1 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
HRH3Q9Y5N1 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HRH3Q9Y5N1 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HRH3Q9Y5N1 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HRH3Q9Y5N1 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HRH3Q9Y5N1 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.41■□□□□ 0.38
HRH3Q9Y5N1 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HRH3Q9Y5N1 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
HRH3Q9Y5N1 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HRH3Q9Y5N1 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HRH3Q9Y5N1 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.4■□□□□ 0.38
HRH3Q9Y5N1 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.4■□□□□ 0.38
HRH3Q9Y5N1 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
HRH3Q9Y5N1 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
HRH3Q9Y5N1 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HRH3Q9Y5N1 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HRH3Q9Y5N1 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HRH3Q9Y5N1 WWOX-216ENST00000569818 525 ntBASIC17.4■□□□□ 0.38
HRH3Q9Y5N1 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HRH3Q9Y5N1 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
HRH3Q9Y5N1 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HRH3Q9Y5N1 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HRH3Q9Y5N1 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
HRH3Q9Y5N1 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.4■□□□□ 0.38
HRH3Q9Y5N1 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
HRH3Q9Y5N1 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HRH3Q9Y5N1 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HRH3Q9Y5N1 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.4■□□□□ 0.38
HRH3Q9Y5N1 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.4■□□□□ 0.38
HRH3Q9Y5N1 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HRH3Q9Y5N1 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HRH3Q9Y5N1 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
HRH3Q9Y5N1 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
HRH3Q9Y5N1 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
HRH3Q9Y5N1 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HRH3Q9Y5N1 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HRH3Q9Y5N1 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.39■□□□□ 0.37
HRH3Q9Y5N1 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.39■□□□□ 0.37
HRH3Q9Y5N1 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HRH3Q9Y5N1 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HRH3Q9Y5N1 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HRH3Q9Y5N1 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
HRH3Q9Y5N1 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HRH3Q9Y5N1 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HRH3Q9Y5N1 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HRH3Q9Y5N1 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HRH3Q9Y5N1 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.39■□□□□ 0.37
HRH3Q9Y5N1 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.39■□□□□ 0.37
HRH3Q9Y5N1 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HRH3Q9Y5N1 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.39■□□□□ 0.37
HRH3Q9Y5N1 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
HRH3Q9Y5N1 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.39■□□□□ 0.37
HRH3Q9Y5N1 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HRH3Q9Y5N1 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HRH3Q9Y5N1 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HRH3Q9Y5N1 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HRH3Q9Y5N1 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
HRH3Q9Y5N1 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HRH3Q9Y5N1 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HRH3Q9Y5N1 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HRH3Q9Y5N1 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
HRH3Q9Y5N1 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
HRH3Q9Y5N1 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.38■□□□□ 0.37
HRH3Q9Y5N1 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HRH3Q9Y5N1 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HRH3Q9Y5N1 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HRH3Q9Y5N1 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.38■□□□□ 0.37
HRH3Q9Y5N1 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
HRH3Q9Y5N1 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HRH3Q9Y5N1 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HRH3Q9Y5N1 AL049812.1-201ENST00000432563 2267 ntBASIC17.38■□□□□ 0.37
HRH3Q9Y5N1 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
HRH3Q9Y5N1 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.38■□□□□ 0.37
HRH3Q9Y5N1 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HRH3Q9Y5N1 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.38■□□□□ 0.37
HRH3Q9Y5N1 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
HRH3Q9Y5N1 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HRH3Q9Y5N1 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
HRH3Q9Y5N1 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HRH3Q9Y5N1 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.38■□□□□ 0.37
HRH3Q9Y5N1 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HRH3Q9Y5N1 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.37■□□□□ 0.37
HRH3Q9Y5N1 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.37■□□□□ 0.37
HRH3Q9Y5N1 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.37■□□□□ 0.37
HRH3Q9Y5N1 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HRH3Q9Y5N1 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HRH3Q9Y5N1 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HRH3Q9Y5N1 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.37■□□□□ 0.37
HRH3Q9Y5N1 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.37■□□□□ 0.37
HRH3Q9Y5N1 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HRH3Q9Y5N1 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
HRH3Q9Y5N1 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HRH3Q9Y5N1 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
HRH3Q9Y5N1 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms